RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 LONRF1Q17RB8 773 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 FAM153CQ494X1 144 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 ANKRD20A4Q4UJ75 823 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 DENND2CQ68D51 928 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 PAQR3Q6TCH7 311 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 AFTPHQ6ULP2 937 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 LIPIQ6XZB0 460 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 CYS1Q717R9 158 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 TRIM69Q86WT6 500 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 KRTAP1-3Q8IUG1 177 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 OR4K2Q8NGD2 314 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 OR2T34Q8NGX1 318 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 OR14C36Q8NHC7 312 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 CALML6Q8TD86 181 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 ASB12Q8WXK4 309 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 DNASE2BQ8WZ79 361 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.25□□□□□ -0.77
SMG9-207ENST00000598860 C9orf72Q96LT7 481 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 WDR83Q9BRX9 315 aaKnown RBP10.25□□□□□ -0.77
SMG9-207ENST00000598860 C1QTNF7Q9BXJ2 289 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 TMEM9BQ9NQ34 198 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 CHRAC1Q9NRG0 131 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 NINJ2Q9NZG7 142 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 SERGEFQ9UGK8 458 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 APPL1Q9UKG1 709 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 ARL5AQ9Y689 179 aa10.25□□□□□ -0.77
SMG9-207ENST00000598860 ATXN2Q99700 1313 aaKnown RBP10.25□□□□□ -0.77
SMG9-207ENST00000598860 KNL1Q8NG31 2342 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 DMDP11532 3685 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 A0A087WUV0 522 aaPredicted RBP10.24□□□□□ -0.77
SMG9-207ENST00000598860 NUDT19A8MXV4 375 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 ACOT7O00154 380 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 PLK4O00444 970 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 BANF1O75531 89 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 TM7SF2O76062 418 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 PCDH8O95206 1070 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 SEMA4FO95754 770 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 SLC4A1P02730 911 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 C1SP09871 688 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 C6P13671 934 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 H2AFXP16104 143 aaPredicted RBP10.24□□□□□ -0.77
SMG9-207ENST00000598860 ENGP17813 658 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 NMBRP28336 390 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 SPAM1P38567 509 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 GPR3P46089 330 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 SPINT3P49223 89 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 ATXN3P54252 364 aaPredicted RBP10.24□□□□□ -0.77
SMG9-207ENST00000598860 CRADDP78560 199 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 ILF2Q12905 390 aaKnown RBP10.24□□□□□ -0.77
SMG9-207ENST00000598860 MTM1Q13496 603 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 NAB1Q13506 487 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 ITGA9Q13797 1035 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 CRYMQ14894 314 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 LRRC73Q5JTD7 316 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 PDPK2PQ6A1A2 396 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 NXNQ6DKJ4 435 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 TSPAN33Q86UF1 283 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 HORMAD1Q86X24 394 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 FBXO15Q8NCQ5 510 aaPredicted RBP10.24□□□□□ -0.77
SMG9-207ENST00000598860 CDKL2Q92772 493 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 DTD2Q96FN9 168 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 CERS2Q96G23 380 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 CFAP36Q96G28 342 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 DNAJC1Q96KC8 554 aaKnown RBP10.24□□□□□ -0.77
SMG9-207ENST00000598860 FAM167BQ9BTA0 163 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 FUT8Q9BYC5 575 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 ZNF552Q9H707 407 aaPredicted RBP10.24□□□□□ -0.77
SMG9-207ENST00000598860 VPS37BQ9H9H4 285 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 PPCSQ9HAB8 311 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 TCF7L1Q9HCS4 588 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 ARFGAP3Q9NP61 516 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 NSMCE4AQ9NXX6 385 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 ITM2BQ9Y287 266 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 DMXL1Q9Y485 3027 aa10.24□□□□□ -0.77
SMG9-207ENST00000598860 CACNA1EQ15878 2313 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 TBC1D3DA0A087WVF3 549 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 TBC1D3IA0A087WXS9 549 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 TBC1D3EA0A087X179 549 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 TBC1D3KA0A087X1G2 549 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 A0A1B0GTW7 788 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 ZCWPW2A0A1B0GU75 182 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 TBC1D3FA6NER0 549 aaPredicted RBP10.23□□□□□ -0.77
SMG9-207ENST00000598860 FAM47DPA6NHR8 397 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 TBC1D3LB9A6J9 549 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 CDX4O14627 284 aaPredicted RBP10.23□□□□□ -0.77
SMG9-207ENST00000598860 PFDN6O15212 129 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 RIPK2O43353 540 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 TBC1D3HP0C7X1 549 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 ITGALP20701 1170 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 TEAD1P28347 426 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 SSTR1P30872 391 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 PPARGP37231 505 aaPredicted RBP10.23□□□□□ -0.77
SMG9-207ENST00000598860 CCR5P51681 352 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 MGAT5Q09328 741 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 ACOX1Q15067 660 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 KYNUQ16719 465 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 ZNF284Q2VY69 593 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 KLHL38Q2WGJ6 581 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 UAP1L1Q3KQV9 507 aa10.23□□□□□ -0.77
SMG9-207ENST00000598860 AARS2Q5JTZ9 985 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms