RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 SPHK1Q9NYA1 384 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 OR6C2Q9NZP2 312 aa14.59□□□□□ -0.07
LIG1-215ENST00000597901 TTC7AQ9ULT0 858 aaPredicted RBP14.59□□□□□ -0.07
LIG1-215ENST00000597901 FARSAQ9Y285 508 aaKnown RBP14.59□□□□□ -0.07
LIG1-215ENST00000597901 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.58□□□□□ -0.08
LIG1-215ENST00000597901 MEN1O00255 615 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 SUV39H1O43463 412 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 AVILO75366 819 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 NDUFS3O75489 264 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 SLCO2B1O94956 709 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 VAPBO95292 243 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 KRT14P02533 472 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 APOA4P06727 396 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 CHRM5P08912 532 aaPredicted RBP14.58□□□□□ -0.08
LIG1-215ENST00000597901 UGT2B7P16662 529 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 AOAHP28039 575 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 PTPN4P29074 926 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 RPS15P62841 145 aaKnown RBP14.58□□□□□ -0.08
LIG1-215ENST00000597901 GPS1Q13098 491 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 DNAJC21Q5F1R6 531 aaKnown RBP14.58□□□□□ -0.08
LIG1-215ENST00000597901 ZNF789Q5FWF6 425 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 PTRHD1Q6GMV3 140 aaKnown RBP14.58□□□□□ -0.08
LIG1-215ENST00000597901 SPESP1Q6UW49 350 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 ZNF517Q6ZMY9 492 aaPredicted RBP14.58□□□□□ -0.08
LIG1-215ENST00000597901 CDHR3Q6ZTQ4 885 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 HOOK3Q86VS8 718 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 REXO1L1PQ8IX06 675 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 CFAP61Q8NHU2 1237 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 FLVCR1-AS1Q8TAF5 88 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 MFSD3Q96ES6 412 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 LRFN5Q96NI6 719 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 TWSG1Q9GZX9 223 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 CLMPQ9H6B4 373 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 FANCEQ9HB96 536 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 MRM3Q9HC36 420 aaKnown RBP14.58□□□□□ -0.08
LIG1-215ENST00000597901 FAM60AQ9NP50 221 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 SYBUQ9NX95 663 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 PLAGL1Q9UM63 463 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 KCNMB2Q9Y691 235 aa14.58□□□□□ -0.08
LIG1-215ENST00000597901 CDC14CA4D256 554 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 TMEM150CB9EJG8 249 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 KDM1AO60341 852 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 ARNTP27540 789 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 COILP38432 576 aaPredicted RBP14.57□□□□□ -0.08
LIG1-215ENST00000597901 MAGEA6P43360 314 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 VPS41P49754 854 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 SARNPP82979 210 aaKnown RBP14.57□□□□□ -0.08
LIG1-215ENST00000597901 KCNJ11Q14654 390 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 ZIC1Q15915 447 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 KYNUQ16719 465 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 LCN10Q6JVE6 187 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 ATG14Q6ZNE5 492 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 SDCCAG8Q86SQ7 713 aaPredicted RBP14.57□□□□□ -0.08
LIG1-215ENST00000597901 TMEM135Q86UB9 458 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 TRIM73Q86UV7 250 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 LRRC6Q86X45 466 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 PTRH1Q86Y79 214 aaKnown RBP14.57□□□□□ -0.08
LIG1-215ENST00000597901 MPP5Q8N3R9 675 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 CPT1BQ92523 772 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 CLIP3Q96DZ5 547 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 ABHD17AQ96GS6 310 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 TCTN2Q96GX1 697 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 CHST8Q9H2A9 424 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 ACTL8Q9H568 366 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 GRPEL1Q9HAV7 217 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 ZNF71Q9NQZ8 489 aaPredicted RBP14.57□□□□□ -0.08
LIG1-215ENST00000597901 SOX13Q9UN79 622 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 POLHQ9Y253 713 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 PIEZO2Q9H5I5 2752 aa14.57□□□□□ -0.08
LIG1-215ENST00000597901 CFAP46Q8IYW2 2715 aa14.56□□□□□ -0.08
LIG1-215ENST00000597901 MAGEB16A2A368 324 aa14.56□□□□□ -0.08
LIG1-215ENST00000597901 ISM1B1AKI9 464 aa14.56□□□□□ -0.08
LIG1-215ENST00000597901 GOLGA8KD6RF30 607 aa14.56□□□□□ -0.08
LIG1-215ENST00000597901 GOLGA8TH3BQL2 631 aa14.56□□□□□ -0.08
LIG1-215ENST00000597901 WISP1O95388 367 aa14.56□□□□□ -0.08
LIG1-215ENST00000597901 RPS3P23396 243 aaKnown RBP eCLIP14.56□□□□□ -0.08
LIG1-215ENST00000597901 GRB7Q14451 532 aa14.56□□□□□ -0.08
LIG1-215ENST00000597901 KIR2DS3Q14952 304 aa14.56□□□□□ -0.08
LIG1-215ENST00000597901 ANKRD22Q5VYY1 191 aa14.56□□□□□ -0.08
LIG1-215ENST00000597901 CAND1Q86VP6 1230 aaKnown RBP14.56□□□□□ -0.08
LIG1-215ENST00000597901 DSELQ8IZU8 1212 aa14.56□□□□□ -0.08
LIG1-215ENST00000597901 PANX3Q96QZ0 392 aa14.56□□□□□ -0.08
LIG1-215ENST00000597901 TCF12Q99081 682 aa14.56□□□□□ -0.08
LIG1-215ENST00000597901 CHRNA10Q9GZZ6 450 aa14.56□□□□□ -0.08
LIG1-215ENST00000597901 ACTR5Q9H9F9 607 aaPredicted RBP14.56□□□□□ -0.08
LIG1-215ENST00000597901 PCMTD2Q9NV79 361 aa14.56□□□□□ -0.08
LIG1-215ENST00000597901 NEU2Q9Y3R4 380 aa14.56□□□□□ -0.08
LIG1-215ENST00000597901 ZNF462Q96JM2 2506 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 GCN1Q92616 2671 aaKnown RBP14.55□□□□□ -0.08
LIG1-215ENST00000597901 SDR42E2A6NKP2 422 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 E7EQ34 232 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 PYCARD-AS1I3L0S3 204 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 KPNA5O15131 536 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 ZNF749O43361 778 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 HCRTR1O43613 425 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 RPN2P04844 631 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 CYP2A7P20853 494 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 CD9P21926 228 aa14.55□□□□□ -0.08
LIG1-215ENST00000597901 PEBP1P30086 187 aaKnown RBP14.55□□□□□ -0.08
LIG1-215ENST00000597901 FMO4P31512 558 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms