RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 NKAIN2Q5VXU1 208 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 CAPRIN2Q6IMN6 1127 aaKnown RBP14.62□□□□□ -0.07
TRIM28-207ENST00000597136 ZNF438Q7Z4V0 828 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 SPRED1Q7Z699 444 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 SLC9B2Q86UD5 537 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 CABS1Q96KC9 395 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 UBXN10Q96LJ8 280 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 SMC6Q96SB8 1091 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 NRTNQ99748 197 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 VPS11Q9H270 941 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 PCMTD2Q9NV79 361 aa14.62□□□□□ -0.07
TRIM28-207ENST00000597136 ATXN7L1Q9ULK2 861 aaPredicted RBP14.62□□□□□ -0.07
TRIM28-207ENST00000597136 A0A087X1B8 175 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 H3BQF6 201 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 VIPP01282 170 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 RPLP0P05388 317 aaKnown RBP14.61□□□□□ -0.07
TRIM28-207ENST00000597136 PNLIPP16233 465 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 ZNF37AP17032 561 aaPredicted RBP14.61□□□□□ -0.07
TRIM28-207ENST00000597136 SLC26A3P40879 764 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 IRF9Q00978 393 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 E2F1Q01094 437 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 HSPA14Q0VDF9 509 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 BIRC2Q13490 618 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 GBX1Q14549 363 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 AMZ1Q400G9 498 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 USP53Q70EK8 1073 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 TMPRSS9Q7Z410 1059 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 CLEC14AQ86T13 490 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 CENPLQ8N0S6 344 aaPredicted RBP14.61□□□□□ -0.07
TRIM28-207ENST00000597136 BANPQ8N9N5 519 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 OR6C4Q8NGE1 309 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 ANKRD49Q8WVL7 239 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 ASZ1Q8WWH4 475 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 JPH3Q8WXH2 748 aaPredicted RBP14.61□□□□□ -0.07
TRIM28-207ENST00000597136 C12orf66Q96MD2 445 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 TBC1D10AQ9BXI6 508 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 ABCG4Q9H172 646 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 LRRN3Q9H3W5 708 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 SYNDIG1Q9H7V2 258 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 SYTL2Q9HCH5 934 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 SLC40A1Q9NP59 571 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 IMP3Q9NV31 184 aaKnown RBP14.61□□□□□ -0.07
TRIM28-207ENST00000597136 EVA1BQ9NVM1 165 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 ADAMTS20P59510 1910 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 ACACAQ13085 2346 aa14.61□□□□□ -0.07
TRIM28-207ENST00000597136 IGF2RP11717 2491 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 KLHL33A6NCF5 533 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 LIN7AO14910 233 aaPredicted RBP14.6□□□□□ -0.07
TRIM28-207ENST00000597136 GPC4O75487 556 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 TSPAN12O95859 305 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 SLC35G4P0C7Q5 338 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 CCDC166P0CW27 439 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 MTHFD1P11586 935 aaKnown RBP14.6□□□□□ -0.07
TRIM28-207ENST00000597136 COL6A2P12110 1019 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 SLC2A4P14672 509 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 HALP42357 657 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 IL2P60568 153 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 CFHR1Q03591 330 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 NR1D2Q14995 579 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 TTLL9Q3SXZ7 439 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 ACSBG2Q5FVE4 666 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 PLEKHS1Q5SXH7 462 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 HES3Q5TGS1 186 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 TBC1D1Q86TI0 1168 aaPredicted RBP14.6□□□□□ -0.07
TRIM28-207ENST00000597136 CPNE9Q8IYJ1 553 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 PLD6Q8N2A8 252 aaKnown RBP14.6□□□□□ -0.07
TRIM28-207ENST00000597136 NKAPQ8N5F7 415 aaKnown RBP14.6□□□□□ -0.07
TRIM28-207ENST00000597136 EEF1AKMT1Q8WVE0 214 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 ALKBH8Q96BT7 664 aaKnown RBP14.6□□□□□ -0.07
TRIM28-207ENST00000597136 CXorf40BQ96DE9 158 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 SCNM1Q9BWG6 230 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 RDH14Q9HBH5 336 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 SSU72Q9NP77 194 aaKnown RBP14.6□□□□□ -0.07
TRIM28-207ENST00000597136 KLK13Q9UKR3 277 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 SEC16AO15027 2179 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 IGHV1OR21-1A0A087WYE8 117 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 NTN3O00634 580 aaPredicted RBP14.6□□□□□ -0.07
TRIM28-207ENST00000597136 SPAG7O75391 227 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 SLCO2B1O94956 709 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 KLHL2O95198 593 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 APOA4P06727 396 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 ACADLP28330 430 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 CD1CP29017 333 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 CRHR1P34998 444 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 CCT5P48643 541 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 DLG1Q12959 904 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 GPR18Q14330 331 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 CDCP2Q5VXM1 449 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 TMEM26Q6ZUK4 368 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 TRIM48Q8IWZ4 208 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 SPATA6LQ8N4H0 392 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 KCTD4Q8WVF5 259 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 PDLIM5Q96HC4 596 aaKnown RBP14.6□□□□□ -0.07
TRIM28-207ENST00000597136 APOPT1Q96IL0 206 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 SLC38A3Q99624 504 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 IGSF5Q9NSI5 407 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 MKS1Q9NXB0 559 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 KCNK4Q9NYG8 393 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 DCDC2Q9UHG0 476 aa14.6□□□□□ -0.07
TRIM28-207ENST00000597136 EIF3FO00303 357 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms