RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 OR5K2Q8NHB8 316 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 MAGEC3Q8TD91 643 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 MCOLN3Q8TDD5 553 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 NAT6Q93015 286 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 NXNL1Q96CM4 212 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 HIST1H2AHQ96KK5 128 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 TGM7Q96PF1 710 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 GFM1Q96RP9 751 aaKnown RBP9.05□□□□□ -0.96
ZNF548-206ENST00000597047 HIST1H2AJQ99878 128 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 RTKNQ9BST9 563 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 MCMBPQ9BTE3 642 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 H2AFJQ9BTM1 129 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 TRIM54Q9BYV2 358 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 SRMSQ9H3Y6 488 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 ALG9Q9H6U8 611 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 MVB12BQ9H7P6 319 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 RDH14Q9HBH5 336 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 PRM3Q9NNZ6 103 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 SLC40A1Q9NP59 571 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 POT1Q9NUX5 634 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 ZNF358Q9NW07 568 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 HRASLS2Q9NWW9 162 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 POLG2Q9UHN1 485 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 ZNF180Q9UJW8 692 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 IKZF3Q9UKT9 509 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 RNF112Q9ULX5 631 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 U3KQA8 63 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 CACNA1AO00555 2505 aa9.05□□□□□ -0.96
ZNF548-206ENST00000597047 PTPRZ1P23471 2315 aaPredicted RBP9.05□□□□□ -0.96
ZNF548-206ENST00000597047 GOLGA4Q13439 2230 aaKnown RBP9.05□□□□□ -0.96
ZNF548-206ENST00000597047 RIF1Q5UIP0 2472 aaKnown RBP9.05□□□□□ -0.96
ZNF548-206ENST00000597047 ARID1BQ8NFD5 2236 aaPredicted RBP9.04□□□□□ -0.96
ZNF548-206ENST00000597047 FAM186AA6NE01 2351 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 A0A087X1B8 175 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 GOLGA6L10A6NI86 522 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 ARHGEF33A8MVX0 844 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 ISM1B1AKI9 464 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 RGS16O15492 202 aaPredicted RBP9.04□□□□□ -0.96
ZNF548-206ENST00000597047 KDM1AO60341 852 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 CDH16O75309 829 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 SPAG7O75391 227 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 RASSF9O75901 435 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 UBXN7O94888 489 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 TOP3BO95985 862 aaKnown RBP9.04□□□□□ -0.96
ZNF548-206ENST00000597047 ALDOAP04075 364 aaKnown RBP9.04□□□□□ -0.96
ZNF548-206ENST00000597047 S100BP04271 92 aaPredicted RBP9.04□□□□□ -0.96
ZNF548-206ENST00000597047 LTA4HP09960 611 aaKnown RBP9.04□□□□□ -0.96
ZNF548-206ENST00000597047 NUDT17P0C025 328 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 FTH1P19P0C7X4 201 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 SLC35E2BP0CK96 405 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 PYGBP11216 843 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 CD1DP15813 335 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 ZNF37AP17032 561 aaPredicted RBP9.04□□□□□ -0.96
ZNF548-206ENST00000597047 TFEBP19484 476 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 CSRP1P21291 193 aaKnown RBP9.04□□□□□ -0.96
ZNF548-206ENST00000597047 SDHBP21912 280 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 ACP1P24666 158 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 CCNFP41002 786 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 ILF2Q12905 390 aaKnown RBP9.04□□□□□ -0.96
ZNF548-206ENST00000597047 PRKAA1Q13131 559 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 SPIDRQ14159 915 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 FAM83EQ2M2I3 478 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 FBXO48Q5FWF7 155 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.04□□□□□ -0.96
ZNF548-206ENST00000597047 PHF19Q5T6S3 580 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 THEMIS2Q5TEJ8 643 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 LRRC8EQ6NSJ5 796 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 C16orf46Q6P387 395 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 KLC3Q6P597 504 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 FOXR1Q6PIV2 292 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 FAM92BQ6ZTR7 304 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 SPRED1Q7Z699 444 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 AMIGO1Q86WK6 493 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 C17orf82Q86X59 251 aaPredicted RBP9.04□□□□□ -0.96
ZNF548-206ENST00000597047 DCUN1D3Q8IWE4 304 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 SYTL1Q8IYJ3 562 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 C4orf33Q8N1A6 199 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 AVL9Q8NBF6 648 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 PPFIBP2Q8ND30 876 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 OR9A1PQ8NGU1 263 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 RAD51AP1Q96B01 352 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 MTBPQ96DY7 904 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 MED8Q96G25 268 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 PKP4Q99569 1192 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 DHRS4Q9BTZ2 278 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 ACAT2Q9BWD1 397 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 ROPN1BQ9BZX4 212 aaPredicted RBP9.04□□□□□ -0.96
ZNF548-206ENST00000597047 KLHL25Q9H0H3 589 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 ATG10Q9H0Y0 220 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 LRRN3Q9H3W5 708 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 KIR3DX1Q9H7L2 352 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 ROPN1Q9HAT0 212 aaPredicted RBP9.04□□□□□ -0.96
ZNF548-206ENST00000597047 NMRAL1Q9HBL8 299 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 POPDC3Q9HBV1 291 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 ZNF446Q9NWS9 450 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 ARL15Q9NXU5 204 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 CD274Q9NZQ7 290 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 CPSF2Q9P2I0 782 aaKnown RBP9.04□□□□□ -0.96
ZNF548-206ENST00000597047 KLHL42Q9P2K6 505 aa9.04□□□□□ -0.96
ZNF548-206ENST00000597047 LNPEPQ9UIQ6 1025 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms