RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 IQCF5A8MTL0 148 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 PFDN6O15212 129 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 KIF5CO60282 957 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 CPNE3O75131 537 aaKnown RBP10.18□□□□□ -0.78
CCDC9-203ENST00000596938 AVILO75366 819 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 SCRG1O75711 98 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 RPN2P04844 631 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 CHRM5P08912 532 aaPredicted RBP10.18□□□□□ -0.78
CCDC9-203ENST00000596938 ST6GAL1P15907 406 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 FNTAP49354 379 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 CDC20Q12834 499 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 ABRQ12979 859 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 KYNUQ16719 465 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 TYSND1Q2T9J0 566 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 RNF187Q5TA31 235 aaPredicted RBP10.18□□□□□ -0.78
CCDC9-203ENST00000596938 ANKRD22Q5VYY1 191 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 PTRHD1Q6GMV3 140 aaKnown RBP10.18□□□□□ -0.78
CCDC9-203ENST00000596938 KIAA0930Q6ICG6 404 aaPredicted RBP10.18□□□□□ -0.78
CCDC9-203ENST00000596938 SPESP1Q6UW49 350 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 CES3Q6UWW8 571 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 UNC5DQ6UXZ4 953 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 TMEM126BQ8IUX1 230 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 VRK3Q8IV63 474 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 SLC35F6Q8N357 371 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 SLC38A9Q8NBW4 561 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 FLVCR1-AS1Q8TAF5 88 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 COG1Q8WTW3 980 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 APOBEC4Q8WW27 367 aaKnown RBP10.18□□□□□ -0.78
CCDC9-203ENST00000596938 CPT1BQ92523 772 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 TCTN2Q96GX1 697 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 BIRC8Q96P09 236 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 OR2A14Q96R47 310 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 AKIRIN1Q9H9L7 192 aaPredicted RBP10.18□□□□□ -0.78
CCDC9-203ENST00000596938 FANCEQ9HB96 536 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 XAB2Q9HCS7 855 aaKnown RBP10.18□□□□□ -0.78
CCDC9-203ENST00000596938 GNPTGQ9UJJ9 305 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 SNX12Q9UMY4 172 aa10.18□□□□□ -0.78
CCDC9-203ENST00000596938 TDRKHQ9Y2W6 561 aaKnown RBP10.18□□□□□ -0.78
CCDC9-203ENST00000596938 GCN1Q92616 2671 aaKnown RBP10.17□□□□□ -0.78
CCDC9-203ENST00000596938 BSNQ9UPA5 3926 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 H3BMM5 538 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 MEN1O00255 615 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 PHF2O75151 1096 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 KATNA1O75449 491 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 CREG1O75629 220 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 ESR1P03372 595 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 KLK3P07288 261 aaPredicted RBP10.17□□□□□ -0.78
CCDC9-203ENST00000596938 PRKAR1AP10644 381 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 PLA2G2AP14555 144 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 UGT2B7P16662 529 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 PAMP19021 973 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 OAS2P29728 719 aaKnown RBP10.17□□□□□ -0.78
CCDC9-203ENST00000596938 VPS41P49754 854 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 RAB28P51157 221 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 CSE1LP55060 971 aaKnown RBP10.17□□□□□ -0.78
CCDC9-203ENST00000596938 POLE2P56282 527 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 DNASE1L3Q13609 305 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 KIR2DS3Q14952 304 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 TMED2Q15363 201 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 KCTD19Q17RG1 926 aaPredicted RBP10.17□□□□□ -0.78
CCDC9-203ENST00000596938 DEFB109BQ30KR1 87 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 ANKRD20A4Q4UJ75 823 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 ZNF789Q5FWF6 425 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 PLEKHS1Q5SXH7 462 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 IZUMO3Q5VZ72 239 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 NEPROQ6NW34 567 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 CDHR3Q6ZTQ4 885 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 OTOAQ7RTW8 1153 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 TMEM135Q86UB9 458 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 HOOK3Q86VS8 718 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 KRT222Q8N1A0 295 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 OR1L3Q8NH93 324 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 LKAAEAR1Q8TD35 194 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 GRK7Q8WTQ7 553 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 CT55Q8WUE5 264 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 SEC14L1Q92503 715 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 SLC22A18Q96BI1 424 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 MENTQ9BUN1 341 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 SLC25A18Q9H1K4 315 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 KCNF1Q9H3M0 494 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 TRMT1Q9NXH9 659 aaKnown RBP10.17□□□□□ -0.78
CCDC9-203ENST00000596938 SPHK1Q9NYA1 384 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 FARSAQ9Y285 508 aaKnown RBP10.17□□□□□ -0.78
CCDC9-203ENST00000596938 MRFAP1Q9Y605 127 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 MRPS18BQ9Y676 258 aaKnown RBP10.17□□□□□ -0.78
CCDC9-203ENST00000596938 ZNF462Q96JM2 2506 aa10.17□□□□□ -0.78
CCDC9-203ENST00000596938 A0A0J9YY10 115 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 GOLGA6L10A0A0M3HER8 536 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 TMEM150CB9EJG8 249 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 GOLGA8KD6RF30 607 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 GOLGA8TH3BQL2 631 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 TMEM63AO94886 807 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 HBQ1P09105 142 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 RAB40ALP0C0E4 278 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 PVRP15151 417 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 TCP1P17987 556 aaKnown RBP10.16□□□□□ -0.78
CCDC9-203ENST00000596938 OGNP20774 298 aaKnown RBP10.16□□□□□ -0.78
CCDC9-203ENST00000596938 CYP2A7P20853 494 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 CD9P21926 228 aa10.16□□□□□ -0.78
CCDC9-203ENST00000596938 PTPN4P29074 926 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms