RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SPATA17Q96L03 361 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 ADAM2Q99965 735 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 ZBED2Q9BTP6 218 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 NTMT1Q9BV86 223 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 SLC29A3Q9BZD2 475 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 NACA2Q9H009 215 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 ATP13A3Q9H7F0 1226 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 AGO1Q9UL18 857 aaKnown RBP12.97□□□□□ -0.33
VRK3-209ENST00000594948 FAM32AQ9Y421 112 aaKnown RBP12.97□□□□□ -0.33
VRK3-209ENST00000594948 PCDHGA10Q9Y5H3 936 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 RAI2Q9Y5P3 530 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 A0A0D9SEW6 157 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 ILVBLA1L0T0 632 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 OR6C75A6NL08 312 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 F8W810 466 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 EBLN1P0CF75 366 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 HOXB9P17482 250 aaPredicted RBP12.97□□□□□ -0.33
VRK3-209ENST00000594948 IGFBP5P24593 272 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 GRK4P32298 578 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 RXRGP48443 463 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 EIF2B2P49770 351 aaKnown RBP12.97□□□□□ -0.33
VRK3-209ENST00000594948 RGS4P49798 205 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 IL5RAQ01344 420 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 VAC14Q08AM6 782 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 TAF10Q12962 218 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 LAPTM5Q13571 262 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 PTGR1Q14914 329 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 BCL2A1Q16548 175 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 CCL14Q16627 93 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 HIST2H2ACQ16777 129 aaPredicted RBP12.97□□□□□ -0.33
VRK3-209ENST00000594948 ADPRMQ3LIE5 342 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 USP39Q53GS9 565 aaKnown RBP12.97□□□□□ -0.33
VRK3-209ENST00000594948 SPANXN4Q5MJ08 99 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 LDLRAP1Q5SW96 308 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 CPZQ66K79 652 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 MSANTD1Q6ZTZ1 278 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 P2RY8Q86VZ1 359 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 TMEM132CQ8N3T6 1108 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 LIX1Q8N485 282 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 SCAIQ8N9R8 606 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 ZFP90Q8TF47 636 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 FRS2Q8WU20 508 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 EFHD2Q96C19 240 aaPredicted RBP12.97□□□□□ -0.33
VRK3-209ENST00000594948 FAM120BQ96EK7 910 aaKnown RBP12.97□□□□□ -0.33
VRK3-209ENST00000594948 CDK5RAP1Q96SZ6 601 aaKnown RBP12.97□□□□□ -0.33
VRK3-209ENST00000594948 APOL4Q9BPW4 351 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 FAM126AQ9BYI3 521 aaPredicted RBP12.97□□□□□ -0.33
VRK3-209ENST00000594948 CCDC90BQ9GZT6 254 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 EPS8L2Q9H6S3 715 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 LRTM1Q9HBL6 345 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 TM9SF3Q9HD45 589 aa12.97□□□□□ -0.33
VRK3-209ENST00000594948 SAMD4AQ9UPU9 718 aaKnown RBP12.97□□□□□ -0.33
VRK3-209ENST00000594948 MYADML2A6NDP7 307 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 TMEM247A6NEH6 219 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 PTGES3LE9PB15 166 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 H3BNC9 293 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 TAPBPO15533 448 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 CLDN11O75508 207 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 NADKO95544 446 aaPredicted RBP12.96□□□□□ -0.33
VRK3-209ENST00000594948 SERPINA1P01009 418 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 PIK3CGP48736 1102 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 CDC20Q12834 499 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 RAPSNQ13702 412 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 NPTX1Q15818 432 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 INAQ16352 499 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 TTLL9Q3SXZ7 439 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 ANKRD34AQ69YU3 496 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 PLEKHG7Q6ZR37 379 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 ADCK1Q86TW2 530 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 IPCEF1Q8WWN9 437 aaPredicted RBP12.96□□□□□ -0.33
VRK3-209ENST00000594948 USP7Q93009 1102 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 NCLNQ969V3 563 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 ITCHQ96J02 903 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 OR52E6Q96RD3 313 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 PTPN18Q99952 460 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 CD244Q9BZW8 370 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 RMND5AQ9H871 391 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 LTB4R2Q9NPC1 389 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 ERVK-18Q9QC07 812 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 UTS2RQ9UKP6 389 aa12.96□□□□□ -0.33
VRK3-209ENST00000594948 GPC6Q9Y625 555 aaPredicted RBP12.96□□□□□ -0.33
VRK3-209ENST00000594948 ISPDA4D126 451 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 HTR3EA5X5Y0 456 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 CLDN24A6NM45 220 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 PER2O15055 1255 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 ULK1O75385 1050 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 CCNDBP1O95273 360 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 PRPS2P11908 318 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 BMP4P12644 408 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 ZNF7P17097 686 aaPredicted RBP12.95□□□□□ -0.34
VRK3-209ENST00000594948 PFKLP17858 780 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 CD40LGP29965 261 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 CD6P30203 668 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 ST13P50502 369 aaKnown RBP12.95□□□□□ -0.34
VRK3-209ENST00000594948 ARHGDIAP52565 204 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 CLDN8P56748 225 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 CSNK2BP67870 215 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 FKBP1BP68106 108 aa12.95□□□□□ -0.34
VRK3-209ENST00000594948 MRPL58Q14197 206 aaKnown RBP12.95□□□□□ -0.34
VRK3-209ENST00000594948 AAK1Q2M2I8 961 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms