RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 MYLK2Q9H1R3 596 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 MLXIPLQ9NP71 852 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 KCNK4Q9NYG8 393 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 NEUROG3Q9Y4Z2 214 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 A0A1W2PQM1 296 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 FAM149AA5PLN7 773 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 FAM221BA6H8Z2 402 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 CASC3O15234 703 aaKnown RBP19.15■□□□□ 0.66
LSM4-203ENST00000593829 B4GAT1O43505 415 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 S1PR4O95977 384 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 CALB2P22676 271 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 CALRP27797 417 aaKnown RBP19.15■□□□□ 0.66
LSM4-203ENST00000593829 ALDH3A1P30838 453 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 MAGEA4P43358 317 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 RASSF2P50749 326 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 ADARP55265 1226 aaKnown RBP19.15■□□□□ 0.66
LSM4-203ENST00000593829 CTBP1Q13363 440 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 PDK4Q16654 411 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 STEAP4Q687X5 459 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 RBM44Q6ZP01 1051 aaKnown RBP19.15■□□□□ 0.66
LSM4-203ENST00000593829 ZNF761Q86XN6 746 aaPredicted RBP19.15■□□□□ 0.66
LSM4-203ENST00000593829 DENND6AQ8IWF6 608 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 ZBED8Q8IZ13 594 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 SSU72Q9NP77 194 aaKnown RBP19.15■□□□□ 0.66
LSM4-203ENST00000593829 IARS2Q9NSE4 1012 aaKnown RBP19.15■□□□□ 0.66
LSM4-203ENST00000593829 TRIM33Q9UPN9 1127 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 PCDHB1Q9Y5F3 818 aa19.15■□□□□ 0.66
LSM4-203ENST00000593829 EDF1O60869 148 aaKnown RBP19.14■□□□□ 0.65
LSM4-203ENST00000593829 ERVK-10P10266 1014 aa19.14■□□□□ 0.65
LSM4-203ENST00000593829 RP1P56715 2156 aa19.14■□□□□ 0.65
LSM4-203ENST00000593829 PLOD1Q02809 727 aaPredicted RBP19.14■□□□□ 0.65
LSM4-203ENST00000593829 FASTKD3Q14CZ7 662 aaKnown RBP19.14■□□□□ 0.65
LSM4-203ENST00000593829 SYTL3Q4VX76 610 aa19.14■□□□□ 0.65
LSM4-203ENST00000593829 CAPRIN2Q6IMN6 1127 aaKnown RBP19.14■□□□□ 0.65
LSM4-203ENST00000593829 RBM12BQ8IXT5 1001 aaKnown RBP19.14■□□□□ 0.65
LSM4-203ENST00000593829 DCBLD1Q8N8Z6 715 aa19.14■□□□□ 0.65
LSM4-203ENST00000593829 CERS2Q96G23 380 aa19.14■□□□□ 0.65
LSM4-203ENST00000593829 C12orf66Q96MD2 445 aa19.14■□□□□ 0.65
LSM4-203ENST00000593829 DEPDC7Q96QD5 511 aa19.14■□□□□ 0.65
LSM4-203ENST00000593829 LRRC37BQ96QE4 947 aa19.14■□□□□ 0.65
LSM4-203ENST00000593829 PANX3Q96QZ0 392 aa19.14■□□□□ 0.65
LSM4-203ENST00000593829 INSM2Q96T92 566 aaPredicted RBP19.14■□□□□ 0.65
LSM4-203ENST00000593829 OR52A5Q9H2C5 316 aa19.14■□□□□ 0.65
LSM4-203ENST00000593829 UCK1Q9HA47 277 aa19.14■□□□□ 0.65
LSM4-203ENST00000593829 PLAC1Q9HBJ0 212 aa19.14■□□□□ 0.65
LSM4-203ENST00000593829 CRYL1Q9Y2S2 319 aa19.14■□□□□ 0.65
LSM4-203ENST00000593829 IQCF5A8MTL0 148 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 PEX11AO75192 247 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 ESR1P03372 595 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 MTHFD1P11586 935 aaKnown RBP19.13■□□□□ 0.65
LSM4-203ENST00000593829 ITGB6P18564 788 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 FMO4P31512 558 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 SLC1A2P43004 574 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 PREPP48147 710 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 BOP1Q14137 746 aaKnown RBP19.13■□□□□ 0.65
LSM4-203ENST00000593829 AMZ1Q400G9 498 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 TMEM26Q6ZUK4 368 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 ARMC2Q8NEN0 867 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 SPDYE1Q8NFV5 336 aaPredicted RBP19.13■□□□□ 0.65
LSM4-203ENST00000593829 NAF1Q96HR8 494 aaKnown RBP19.13■□□□□ 0.65
LSM4-203ENST00000593829 BIRC8Q96P09 236 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 PHACTR1Q9C0D0 580 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 SAYSD1Q9NPB0 183 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 IMP3Q9NV31 184 aaKnown RBP19.13■□□□□ 0.65
LSM4-203ENST00000593829 FBXO5Q9UKT4 447 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 NCOR2Q9Y618 2525 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 IGHV1OR21-1A0A087WYE8 117 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 H3BMM5 538 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 GCAP28676 217 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 GPLD1P80108 840 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 TARDBPQ13148 414 aaKnown RBP eCLIP19.13■□□□□ 0.65
LSM4-203ENST00000593829 FRG1Q14331 258 aaKnown RBP19.13■□□□□ 0.65
LSM4-203ENST00000593829 ZNF789Q5FWF6 425 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 KIRREL3Q8IZU9 778 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 PYROXD1Q8WU10 500 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 TMEM159Q96B96 161 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 SPDL1Q96EA4 605 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 SAR1AQ9NR31 198 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 FBXO6Q9NRD1 293 aaPredicted RBP19.13■□□□□ 0.65
LSM4-203ENST00000593829 FETUBQ9UGM5 382 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 MSRB2Q9Y3D2 182 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 CFAP20Q9Y6A4 193 aaKnown RBP19.13■□□□□ 0.65
LSM4-203ENST00000593829 PTPRBP23467 1997 aa19.13■□□□□ 0.65
LSM4-203ENST00000593829 PIKFYVEQ9Y2I7 2098 aa19.12■□□□□ 0.65
LSM4-203ENST00000593829 SLC5A10A0PJK1 596 aa19.12■□□□□ 0.65
LSM4-203ENST00000593829 LILRA5A6NI73 299 aa19.12■□□□□ 0.65
LSM4-203ENST00000593829 FOXO6A8MYZ6 492 aa19.12■□□□□ 0.65
LSM4-203ENST00000593829 D6RAR5 112 aa19.12■□□□□ 0.65
LSM4-203ENST00000593829 IFRD1O00458 451 aaPredicted RBP19.12■□□□□ 0.65
LSM4-203ENST00000593829 CD1CP29017 333 aa19.12■□□□□ 0.65
LSM4-203ENST00000593829 PDHA2P29803 388 aa19.12■□□□□ 0.65
LSM4-203ENST00000593829 CCR7P32248 378 aa19.12■□□□□ 0.65
LSM4-203ENST00000593829 CD151P48509 253 aa19.12■□□□□ 0.65
LSM4-203ENST00000593829 EPHA4P54764 986 aa19.12■□□□□ 0.65
LSM4-203ENST00000593829 TAF11Q15544 211 aa19.12■□□□□ 0.65
LSM4-203ENST00000593829 CLPPQ16740 277 aaPredicted RBP19.12■□□□□ 0.65
LSM4-203ENST00000593829 CTSL3PQ5NE16 218 aa19.12■□□□□ 0.65
LSM4-203ENST00000593829 NAPRTQ6XQN6 538 aa19.12■□□□□ 0.65
LSM4-203ENST00000593829 MARCH9Q86YJ5 346 aa19.12■□□□□ 0.65
LSM4-203ENST00000593829 OR10G6Q8NH81 332 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms