RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 AOAHP28039 575 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 CCR10P46092 362 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 CDC20Q12834 499 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 CRTC2Q53ET0 693 aaPredicted RBP14.79□□□□□ -0.04
TRIM28-203ENST00000593582 RNF187Q5TA31 235 aaPredicted RBP14.79□□□□□ -0.04
TRIM28-203ENST00000593582 ANKRD22Q5VYY1 191 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 SPESP1Q6UW49 350 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 KRT222Q8N1A0 295 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 MCUQ8NE86 351 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 GRK7Q8WTQ7 553 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 CPT1BQ92523 772 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 P2RY12Q9H244 342 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 XAB2Q9HCS7 855 aaKnown RBP14.79□□□□□ -0.04
TRIM28-203ENST00000593582 LATS2Q9NRM7 1088 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 SNX12Q9UMY4 172 aa14.79□□□□□ -0.04
TRIM28-203ENST00000593582 MRPS18BQ9Y676 258 aaKnown RBP14.79□□□□□ -0.04
TRIM28-203ENST00000593582 PIKFYVEQ9Y2I7 2098 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 MAGEB16A2A368 324 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 SDR42E2A6NKP2 422 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 C21orf140B9A014 251 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 GOLGA8KD6RF30 607 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 GOLGA8TH3BQL2 631 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 KATNA1O75449 491 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 GPC4O75487 556 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 SLCO2B1O94956 709 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 CHRM5P08912 532 aaPredicted RBP14.78□□□□□ -0.04
TRIM28-203ENST00000593582 FNTAP49354 379 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 EIF3BP55884 814 aaKnown RBP14.78□□□□□ -0.04
TRIM28-203ENST00000593582 ABRQ12979 859 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 KIAA0930Q6ICG6 404 aaPredicted RBP14.78□□□□□ -0.04
TRIM28-203ENST00000593582 C16orf46Q6P387 395 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 UNC5DQ6UXZ4 953 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 OTOAQ7RTW8 1153 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 CAND1Q86VP6 1230 aaKnown RBP14.78□□□□□ -0.04
TRIM28-203ENST00000593582 VRK3Q8IV63 474 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 CFAP61Q8NHU2 1237 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 LKAAEAR1Q8TD35 194 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 TRAPPC9Q96Q05 1148 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 TCF12Q99081 682 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 CDYLQ9Y232 598 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 NEU2Q9Y3R4 380 aa14.78□□□□□ -0.04
TRIM28-203ENST00000593582 BSNQ9UPA5 3926 aa14.77□□□□□ -0.04
TRIM28-203ENST00000593582 B8ZZF3 427 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 TMEM150CB9EJG8 249 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 H3BMM5 538 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 GOLGA8MH3BSY2 632 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 TERTO14746 1132 aaKnown RBP14.77□□□□□ -0.05
TRIM28-203ENST00000593582 TMEM63AO94886 807 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 KLK3P07288 261 aaPredicted RBP14.77□□□□□ -0.05
TRIM28-203ENST00000593582 TPBGLP0DKB5 382 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 PVRP15151 417 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 UGT2B7P16662 529 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 OAS2P29728 719 aaKnown RBP14.77□□□□□ -0.05
TRIM28-203ENST00000593582 RAB28P51157 221 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 POLE2P56282 527 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 DNASE1L3Q13609 305 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 TYSND1Q2T9J0 566 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 TTC23LQ6PF05 361 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 DCUN1D3Q8IWE4 304 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 CT55Q8WUE5 264 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 SKA2Q8WVK7 121 aaPredicted RBP14.77□□□□□ -0.05
TRIM28-203ENST00000593582 N4BP2L2Q92802 583 aaPredicted RBP14.77□□□□□ -0.05
TRIM28-203ENST00000593582 TCTN2Q96GX1 697 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 SERPINB12Q96P63 405 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 OR2A14Q96R47 310 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 GPR87Q9BY21 358 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 KLHL25Q9H0H3 589 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 ADNPQ9H2P0 1102 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 GEMIN8Q9NWZ8 242 aaKnown RBP14.77□□□□□ -0.05
TRIM28-203ENST00000593582 SERTAD3Q9UJW9 196 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 PLAGL1Q9UM63 463 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 VPS9D1Q9Y2B5 631 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 PCDHGA6Q9Y5G7 932 aa14.77□□□□□ -0.05
TRIM28-203ENST00000593582 A0A0J9YY10 115 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 FAM237BA0A1B0GVD1 139 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 ZNF185O15231 689 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 ESR1P03372 595 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 TCP1P17987 556 aaKnown RBP14.76□□□□□ -0.05
TRIM28-203ENST00000593582 OGNP20774 298 aaKnown RBP14.76□□□□□ -0.05
TRIM28-203ENST00000593582 CYP2A7P20853 494 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 FMO4P31512 558 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 ADARP55265 1226 aaKnown RBP14.76□□□□□ -0.05
TRIM28-203ENST00000593582 RPS15P62841 145 aaKnown RBP14.76□□□□□ -0.05
TRIM28-203ENST00000593582 NFATC3Q12968 1075 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 DHX34Q14147 1143 aaKnown RBP14.76□□□□□ -0.05
TRIM28-203ENST00000593582 ERV3-1Q14264 604 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 KIR2DS3Q14952 304 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 PPP1R7Q15435 360 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 KYNUQ16719 465 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 DEFB109BQ30KR1 87 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 ANKRD20A4Q4UJ75 823 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 NEPROQ6NW34 567 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 CDHR3Q6ZTQ4 885 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 TRIM73Q86UV7 250 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 C19orf47Q8N9M1 422 aaKnown RBP14.76□□□□□ -0.05
TRIM28-203ENST00000593582 OR1L3Q8NH93 324 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 APOBEC4Q8WW27 367 aaKnown RBP14.76□□□□□ -0.05
TRIM28-203ENST00000593582 LPGAT1Q92604 370 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 MR1Q95460 341 aa14.76□□□□□ -0.05
TRIM28-203ENST00000593582 BIRC8Q96P09 236 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms