RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 TRIM58Q8NG06 486 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 OR8K5Q8NH50 307 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 CPT1CQ8TCG5 803 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 ZNF501Q96CX3 271 aaPredicted RBP12.8□□□□□ -0.36
H3F3B-213ENST00000593254 SGSM3Q96HU1 749 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 NRTNQ99748 197 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 HGH1Q9BTY7 390 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 PITPNM3Q9BZ71 974 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 LHX9Q9NQ69 397 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 EIF2B3Q9NR50 452 aaKnown RBP12.8□□□□□ -0.36
H3F3B-213ENST00000593254 KCND3Q9UK17 655 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 ZKSCAN5Q9Y2L8 839 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 TCAF1Q9Y4C2 921 aa12.8□□□□□ -0.36
H3F3B-213ENST00000593254 SETD2Q9BYW2 2564 aaPredicted RBP12.8□□□□□ -0.36
H3F3B-213ENST00000593254 SLC5A10A0PJK1 596 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 A1L4Q6 167 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 GSAPA4D1B5 854 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 SLC9B1P1A6NJY1 282 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 C21orf140B9A014 251 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 OR1I1O60431 355 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 CPNE3O75131 537 aaKnown RBP12.79□□□□□ -0.36
H3F3B-213ENST00000593254 FGGP02679 453 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 PDGFAP04085 211 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 FURINP09958 794 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 OR56A5P0C7T3 313 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 ACADLP28330 430 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 PRDX3P30048 256 aaKnown RBP12.79□□□□□ -0.36
H3F3B-213ENST00000593254 DNASE1L3Q13609 305 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 GPR19Q15760 415 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 TMTC4Q5T4D3 741 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 LYPLAL1Q5VWZ2 237 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 C4orf22Q6V702 233 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 AMIGO1Q86WK6 493 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 ADGRF3Q8IZF5 1079 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 EFCAB3Q8N7B9 438 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 OR4L1Q8NH43 312 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 CT55Q8WUE5 264 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 MAIP1Q8WWC4 291 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 ELMO1Q92556 727 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 TTC1Q99614 292 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 LATS2Q9NRM7 1088 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 KCND1Q9NSA2 647 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 SOHLH2Q9NX45 425 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 TLK1Q9UKI8 766 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 PCDHB3Q9Y5E6 796 aa12.79□□□□□ -0.36
H3F3B-213ENST00000593254 ITPR3Q14573 2671 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 ANKRD12Q6UB98 2062 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 TTLL8A6PVC2 850 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 BHMG1C9JSJ3 638 aaPredicted RBP12.78□□□□□ -0.36
H3F3B-213ENST00000593254 RFPL1O75677 317 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 SCRG1O75711 98 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 DDAH2O95865 285 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 RECKO95980 971 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 MSL3P1P0C860 447 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 DCTP40126 519 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 PMS2P54278 862 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 PRAMEP78395 509 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 PLOD1Q02809 727 aaPredicted RBP12.78□□□□□ -0.36
H3F3B-213ENST00000593254 PRKG2Q13237 762 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 SEMA3AQ14563 771 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 PCID2Q5JVF3 399 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 ZNF517Q6ZMY9 492 aaPredicted RBP12.78□□□□□ -0.36
H3F3B-213ENST00000593254 TMEM126BQ8IUX1 230 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 TBC1D21Q8IYX1 336 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 PPHLN1Q8NEY8 458 aaKnown RBP12.78□□□□□ -0.36
H3F3B-213ENST00000593254 OR5AR1Q8NGP9 310 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 OR6P1Q8NGX9 317 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 XKR8Q9H6D3 395 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 AKIRIN1Q9H9L7 192 aaPredicted RBP12.78□□□□□ -0.36
H3F3B-213ENST00000593254 SYTL2Q9HCH5 934 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 ICKQ9UPZ9 632 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 POLHQ9Y253 713 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 ASF1AQ9Y294 204 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 CCDC88CQ9P219 2028 aa12.78□□□□□ -0.36
H3F3B-213ENST00000593254 F8P00451 2351 aa12.77□□□□□ -0.36
H3F3B-213ENST00000593254 WIPF3A6NGB9 483 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 C2orf74A8MZ97 194 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 F8W8V4 182 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 CEP104O60308 925 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 KATNA1O75449 491 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 CREG1O75629 220 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 ST6GAL1P15907 406 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 COL8A1P27658 744 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 SHMT2P34897 504 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 PPARGP37231 505 aaPredicted RBP12.77□□□□□ -0.37
H3F3B-213ENST00000593254 KCNJ1P48048 391 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 SESN2P58004 480 aaPredicted RBP12.77□□□□□ -0.37
H3F3B-213ENST00000593254 BASP1P80723 227 aaKnown RBP12.77□□□□□ -0.37
H3F3B-213ENST00000593254 ERV3-1Q14264 604 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 BRD3Q15059 726 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 SYTL3Q4VX76 610 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 FASTKD1Q53R41 847 aaKnown RBP12.77□□□□□ -0.37
H3F3B-213ENST00000593254 FAM199XQ6PEV8 388 aaPredicted RBP12.77□□□□□ -0.37
H3F3B-213ENST00000593254 NAPRTQ6XQN6 538 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 MAMDC2Q7Z304 686 aaPredicted RBP12.77□□□□□ -0.37
H3F3B-213ENST00000593254 APLFQ8IW19 511 aaPredicted RBP12.77□□□□□ -0.37
H3F3B-213ENST00000593254 SLC38A9Q8NBW4 561 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 OR5K2Q8NHB8 316 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 LRFN5Q96NI6 719 aa12.77□□□□□ -0.37
H3F3B-213ENST00000593254 TRAPPC9Q96Q05 1148 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms