RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 LUZP4Q9P127 313 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 PLAGL1Q9UM63 463 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 G3BP2Q9UN86 482 aaKnown RBP19.79■□□□□ 0.76
TRIM47-207ENST00000593089 PCSK5Q92824 1860 aa19.79■□□□□ 0.76
TRIM47-207ENST00000593089 CCDC162PA2VCL2 907 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 MIF4GDA9UHW6 222 aaKnown RBP19.78■□□□□ 0.76
TRIM47-207ENST00000593089 QSOX1O00391 747 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 HCRTR1O43613 425 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 SORBS2O94875 1100 aaKnown RBP19.78■□□□□ 0.76
TRIM47-207ENST00000593089 CHRM5P08912 532 aaPredicted RBP19.78■□□□□ 0.76
TRIM47-207ENST00000593089 CBSLP0DN79 551 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 ACADLP28330 430 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 OTX2P32243 289 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 FOXN2P32314 431 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 CBSP35520 551 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 ZIC1Q15915 447 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 C1orf189Q5VU69 101 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 ZNF385CQ66K41 422 aaPredicted RBP19.78■□□□□ 0.76
TRIM47-207ENST00000593089 MED25Q71SY5 747 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 LINC00523Q86TU6 105 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 RAB43Q86YS6 212 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 TBC1D21Q8IYX1 336 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 SYCE1Q8N0S2 351 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 TMEM102Q8N9M5 508 aaPredicted RBP19.78■□□□□ 0.76
TRIM47-207ENST00000593089 DNAAF3Q8N9W5 541 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 GALNT11Q8NCW6 608 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.78■□□□□ 0.76
TRIM47-207ENST00000593089 TCTN2Q96GX1 697 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 OR2A14Q96R47 310 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 SPRTNQ9H040 489 aaPredicted RBP19.78■□□□□ 0.76
TRIM47-207ENST00000593089 SPHK1Q9NYA1 384 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 PADI2Q9Y2J8 665 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 MAP4K5Q9Y4K4 846 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 PCDHGB7Q9Y5F8 929 aa19.78■□□□□ 0.76
TRIM47-207ENST00000593089 FER1L5A0AVI2 2057 aa19.77■□□□□ 0.76
TRIM47-207ENST00000593089 A0A0U1RQJ8 604 aa19.77■□□□□ 0.76
TRIM47-207ENST00000593089 DPM1O60762 260 aa19.77■□□□□ 0.76
TRIM47-207ENST00000593089 OR2B3O76000 313 aa19.77■□□□□ 0.76
TRIM47-207ENST00000593089 TPBGLP0DKB5 382 aa19.77■□□□□ 0.76
TRIM47-207ENST00000593089 PSMA3P25788 255 aa19.77■□□□□ 0.76
TRIM47-207ENST00000593089 RRADP55042 308 aa19.77■□□□□ 0.76
TRIM47-207ENST00000593089 RAPSNQ13702 412 aa19.77■□□□□ 0.76
TRIM47-207ENST00000593089 MLIPQ5VWP3 458 aa19.77■□□□□ 0.76
TRIM47-207ENST00000593089 PACS1Q6VY07 963 aa19.77■□□□□ 0.76
TRIM47-207ENST00000593089 ATG4AQ8WYN0 398 aa19.77■□□□□ 0.76
TRIM47-207ENST00000593089 PSMG3-AS1Q96PY0 264 aa19.77■□□□□ 0.76
TRIM47-207ENST00000593089 LRRC4CQ9HCJ2 640 aa19.77■□□□□ 0.76
TRIM47-207ENST00000593089 GPR83Q9NYM4 423 aa19.77■□□□□ 0.76
TRIM47-207ENST00000593089 IMPACTQ9P2X3 320 aa19.77■□□□□ 0.76
TRIM47-207ENST00000593089 POLG2Q9UHN1 485 aa19.77■□□□□ 0.76
TRIM47-207ENST00000593089 CCDC88CQ9P219 2028 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 A0A0J9YY10 115 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 SLC5A10A0PJK1 596 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 BHMG1C9JSJ3 638 aaPredicted RBP19.76■□□□□ 0.75
TRIM47-207ENST00000593089 OR1I1O60431 355 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 OR56A5P0C7T3 313 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 GABRA4P48169 554 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 CSE1LP55060 971 aaKnown RBP19.76■□□□□ 0.75
TRIM47-207ENST00000593089 KIF5AQ12840 1032 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 CDH17Q12864 832 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 JMJD6Q6NYC1 403 aaPredicted RBP19.76■□□□□ 0.75
TRIM47-207ENST00000593089 OR5K2Q8NHB8 316 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 FLVCR1-AS1Q8TAF5 88 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 SGSM3Q96HU1 749 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 BAG1Q99933 345 aaPredicted RBP19.76■□□□□ 0.75
TRIM47-207ENST00000593089 DHRS4Q9BTZ2 278 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 RBSNQ9H1K0 784 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 IRAK4Q9NWZ3 460 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 SLC2A6Q9UGQ3 507 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 GPN3Q9UHW5 284 aaPredicted RBP19.76■□□□□ 0.75
TRIM47-207ENST00000593089 AP1M2Q9Y6Q5 423 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 SEC16AO15027 2179 aa19.76■□□□□ 0.75
TRIM47-207ENST00000593089 SNRNP200O75643 2136 aaKnown RBP19.75■□□□□ 0.75
TRIM47-207ENST00000593089 ISM1B1AKI9 464 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 H3BMH7 237 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 AGFG2O95081 481 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 GAS8O95995 478 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 GOT2P00505 430 aaKnown RBP19.75■□□□□ 0.75
TRIM47-207ENST00000593089 CTSBP07858 339 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 SLC9A5Q14940 896 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 INPP5JQ15735 1006 aaPredicted RBP19.75■□□□□ 0.75
TRIM47-207ENST00000593089 KYNUQ16719 465 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 PRR30Q53SZ7 412 aaPredicted RBP19.75■□□□□ 0.75
TRIM47-207ENST00000593089 FHL5Q5TD97 284 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 PPP1R21Q6ZMI0 780 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 GLIS1Q8NBF1 620 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 OR13J1Q8NGT2 312 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 HDAC10Q969S8 669 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 DESI2Q9BSY9 194 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 SLAMF7Q9NQ25 335 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 OR6C2Q9NZP2 312 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 MAP10Q9P2G4 905 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 DHCR7Q9UBM7 475 aaKnown RBP19.75■□□□□ 0.75
TRIM47-207ENST00000593089 PTRH2Q9Y3E5 179 aaKnown RBP19.75■□□□□ 0.75
TRIM47-207ENST00000593089 SHANK1Q9Y566 2161 aa19.75■□□□□ 0.75
TRIM47-207ENST00000593089 HEATR9A2RTY3 570 aa19.74■□□□□ 0.75
TRIM47-207ENST00000593089 KLF7O75840 302 aaPredicted RBP19.74■□□□□ 0.75
TRIM47-207ENST00000593089 PEBP1P30086 187 aaKnown RBP19.74■□□□□ 0.75
TRIM47-207ENST00000593089 LYPLAL1Q5VWZ2 237 aa19.74■□□□□ 0.75
TRIM47-207ENST00000593089 SLC6A19Q695T7 634 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms