RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 BIRC8Q96P09 236 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 FAM111AQ96PZ2 611 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 NDNQ99608 321 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 TIMM29Q9BSF4 260 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 P2RY12Q9H244 342 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 GPAMQ9HCL2 828 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 UCKL1Q9NWZ5 548 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 KCNK4Q9NYG8 393 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 PLEKHM1Q9Y4G2 1056 aa11.64□□□□□ -0.55
DDX39A-219ENST00000592927 DNMT3AQ9Y6K1 912 aaPredicted RBP11.64□□□□□ -0.55
DDX39A-219ENST00000592927 GOLGA4Q13439 2230 aaKnown RBP11.64□□□□□ -0.55
DDX39A-219ENST00000592927 COL6A6A6NMZ7 2263 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 TEP1Q99973 2627 aaKnown RBP11.63□□□□□ -0.55
DDX39A-219ENST00000592927 CCDC189A1A4V9 331 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 LMO7DNF2Z398 122 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 BIRC5O15392 142 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 FFAR2O15552 330 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 PHGDHO43175 533 aaKnown RBP11.63□□□□□ -0.55
DDX39A-219ENST00000592927 SGTAO43765 313 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 PLIN3O60664 434 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 KCNJ13O60928 360 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 KLHL2O95198 593 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 WISP3O95389 354 aaPredicted RBP11.63□□□□□ -0.55
DDX39A-219ENST00000592927 ANXA6P08133 673 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 CELA2BP08218 269 aaPredicted RBP11.63□□□□□ -0.55
DDX39A-219ENST00000592927 ALPPL2P10696 532 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 AK4P27144 223 aaPredicted RBP11.63□□□□□ -0.55
DDX39A-219ENST00000592927 PBLDP30039 288 aaPredicted RBP11.63□□□□□ -0.55
DDX39A-219ENST00000592927 FMO4P31512 558 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 ACTR1BP42025 376 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 PRLHRP49683 370 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 ACTR1AP61163 376 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 PDAP1Q13442 181 aaKnown RBP11.63□□□□□ -0.55
DDX39A-219ENST00000592927 PDK4Q16654 411 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 AGAP9Q5VTM2 703 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 PTRHD1Q6GMV3 140 aaKnown RBP11.63□□□□□ -0.55
DDX39A-219ENST00000592927 SLC30A9Q6PML9 568 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 ZNF574Q6ZN55 896 aaPredicted RBP11.63□□□□□ -0.55
DDX39A-219ENST00000592927 RGS9BPQ6ZS82 235 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 CDHR3Q6ZTQ4 885 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 KANSL1Q7Z3B3 1105 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 TAX1BP1Q86VP1 789 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 AMZ2Q86W34 360 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 TRIM42Q8IWZ5 723 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 BEND7Q8N7W2 519 aaPredicted RBP11.63□□□□□ -0.55
DDX39A-219ENST00000592927 CCL4L1Q8NHW4 92 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 RAB3IL1Q8TBN0 382 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 RDH11Q8TC12 318 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 OLFM1Q99784 485 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 PAIP2Q9BPZ3 127 aaKnown RBP11.63□□□□□ -0.55
DDX39A-219ENST00000592927 DUSP23Q9BVJ7 150 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 TSSK1BQ9BXA7 367 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 FAM117AQ9C073 453 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 KLC4Q9NSK0 619 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 SLC17A7Q9P2U7 560 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 FTSJ1Q9UET6 329 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 SLC23A2Q9UGH3 650 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 KCNK6Q9Y257 313 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 DNAJC16Q9Y2G8 782 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 HEMK1Q9Y5R4 338 aaPredicted RBP11.63□□□□□ -0.55
DDX39A-219ENST00000592927 PRSS21Q9Y6M0 314 aa11.63□□□□□ -0.55
DDX39A-219ENST00000592927 MYO9AB2RTY4 2548 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 KLHL33A6NCF5 533 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 MGAT4DA6NG13 374 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 E5RI56 91 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 YY2O15391 372 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 FTH1P02794 183 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 PROCP04070 461 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 LTA4HP09960 611 aaKnown RBP11.62□□□□□ -0.55
DDX39A-219ENST00000592927 SERPINB4P48594 390 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 UCNP55089 124 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 CDKN2DP55273 166 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 NFATC3Q12968 1075 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 ACAP2Q15057 778 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 DEFB133Q30KQ1 61 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 TBC1D25Q3MII6 688 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 C4orf17Q53FE4 359 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 CTSL3PQ5NE16 218 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 KLC3Q6P597 504 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 C11orf96Q7Z7L8 435 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 NRROSQ86YC3 692 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 CENPLQ8N0S6 344 aaPredicted RBP11.62□□□□□ -0.55
DDX39A-219ENST00000592927 NKAPQ8N5F7 415 aaKnown RBP11.62□□□□□ -0.55
DDX39A-219ENST00000592927 EID2Q8N6I1 236 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 ZNF248Q8NDW4 579 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 FAM46DQ8NEK8 389 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 ARMC2Q8NEN0 867 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 SREK1Q8WXA9 508 aaKnown RBP11.62□□□□□ -0.55
DDX39A-219ENST00000592927 UBXN10Q96LJ8 280 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 LINC00615Q96LM1 132 aaPredicted RBP11.62□□□□□ -0.55
DDX39A-219ENST00000592927 PANX3Q96QZ0 392 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 CCM2Q9BSQ5 444 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 EPN3Q9H201 632 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 OSGEPL1Q9H4B0 414 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 NMRAL1Q9HBL8 299 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 MLXIPLQ9NP71 852 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 LATS2Q9NRM7 1088 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 NLGN3Q9NZ94 848 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 TMEM216Q9P0N5 145 aa11.62□□□□□ -0.55
DDX39A-219ENST00000592927 TAAR2Q9P1P5 351 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms