RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 VAPBO95292 243 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 APOA4P06727 396 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 CHRM5P08912 532 aaPredicted RBP13.43□□□□□ -0.26
APOC1-208ENST00000592535 FURINP09958 794 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 SFTPCP11686 197 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 UGT2B7P16662 529 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 AOAHP28039 575 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 COILP38432 576 aaPredicted RBP13.43□□□□□ -0.26
APOC1-208ENST00000592535 NFKB2Q00653 900 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 GPS2Q13227 327 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 ERV3-1Q14264 604 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 CYP1B1Q16678 543 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 CRTC2Q53ET0 693 aaPredicted RBP13.43□□□□□ -0.26
APOC1-208ENST00000592535 DNAJC21Q5F1R6 531 aaKnown RBP13.43□□□□□ -0.26
APOC1-208ENST00000592535 ZNF789Q5FWF6 425 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 PTRHD1Q6GMV3 140 aaKnown RBP13.43□□□□□ -0.26
APOC1-208ENST00000592535 SLC38A9Q8NBW4 561 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 OR1L3Q8NH93 324 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 FLVCR1-AS1Q8TAF5 88 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 ASZ1Q8WWH4 475 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 CPT1BQ92523 772 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 OR2A14Q96R47 310 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 OSBPL9Q96SU4 736 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 ADNPQ9H2P0 1102 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 FANCEQ9HB96 536 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 GNPTGQ9UJJ9 305 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 KCND3Q9UK17 655 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 PCDHB3Q9Y5E6 796 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 PCDHGA6Q9Y5G7 932 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 ZNF462Q96JM2 2506 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 FER1L5A0AVI2 2057 aa13.43□□□□□ -0.26
APOC1-208ENST00000592535 CFAP46Q8IYW2 2715 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 C21orf140B9A014 251 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 CREG1O75629 220 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 RPS3P23396 243 aaKnown RBP eCLIP13.42□□□□□ -0.263e-18■■■□□ 19
APOC1-208ENST00000592535 PEBP1P30086 187 aaKnown RBP13.42□□□□□ -0.26
APOC1-208ENST00000592535 EIF3BP55884 814 aaKnown RBP13.42□□□□□ -0.26
APOC1-208ENST00000592535 SARNPP82979 210 aaKnown RBP13.42□□□□□ -0.26
APOC1-208ENST00000592535 KCNAB2Q13303 367 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 TMED2Q15363 201 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 CTSL3PQ5NE16 218 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 CCDC137Q6PK04 289 aaKnown RBP13.42□□□□□ -0.26
APOC1-208ENST00000592535 CDHR3Q6ZTQ4 885 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 TMEM135Q86UB9 458 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 CAND1Q86VP6 1230 aaKnown RBP13.42□□□□□ -0.26
APOC1-208ENST00000592535 HOOK3Q86VS8 718 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 C19orf47Q8N9M1 422 aaKnown RBP13.42□□□□□ -0.26
APOC1-208ENST00000592535 CFAP61Q8NHU2 1237 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 MR1Q95460 341 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 PANX3Q96QZ0 392 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 TRIM56Q9BRZ2 755 aaKnown RBP13.42□□□□□ -0.26
APOC1-208ENST00000592535 FAM117AQ9C073 453 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 TWSG1Q9GZX9 223 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 SLC25A18Q9H1K4 315 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 SYTL2Q9HCH5 934 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 FAM60AQ9NP50 221 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 TRMT1Q9NXH9 659 aaKnown RBP13.42□□□□□ -0.26
APOC1-208ENST00000592535 OR6C2Q9NZP2 312 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 CIDEBQ9UHD4 219 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 NEU2Q9Y3R4 380 aa13.42□□□□□ -0.26
APOC1-208ENST00000592535 CDC14CA4D256 554 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 GOLGA8MH3BSY2 632 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 ZSCAN12O43309 604 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 MAP3K7O43318 606 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 SLC28A2O43868 658 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 PHF2O75151 1096 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 SLCO2B1O94956 709 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 MSL3P1P0C860 447 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 PKLRP30613 574 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 RPS18P62269 152 aaKnown RBP13.41□□□□□ -0.26
APOC1-208ENST00000592535 GRB7Q14451 532 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 ZIC1Q15915 447 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 TYSND1Q2T9J0 566 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 PLEKHS1Q5SXH7 462 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 KIAA0930Q6ICG6 404 aaPredicted RBP13.41□□□□□ -0.26
APOC1-208ENST00000592535 LCN10Q6JVE6 187 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 CASC4Q6P4E1 433 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 UNC5DQ6UXZ4 953 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 LRRC6Q86X45 466 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 DCUN1D3Q8IWE4 304 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 LMNTD1Q8N9Z9 388 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 ACTRT1Q8TDG2 376 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 APOBEC4Q8WW27 367 aaKnown RBP13.41□□□□□ -0.26
APOC1-208ENST00000592535 LPGAT1Q92604 370 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 LRFN5Q96NI6 719 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 IL17FQ96PD4 163 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 NAP1L3Q99457 506 aaPredicted RBP13.41□□□□□ -0.26
APOC1-208ENST00000592535 MENTQ9BUN1 341 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 CHST8Q9H2A9 424 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 ACTL8Q9H568 366 aa13.41□□□□□ -0.26
APOC1-208ENST00000592535 A0A0J9YY10 115 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 ISM1B1AKI9 464 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 PYCARD-AS1I3L0S3 204 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 J3QKU1 62 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 ZNF185O15231 689 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 HCRTR1O43613 425 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 KDM1AO60341 852 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 NIPSNAP2O75323 286 aa13.4□□□□□ -0.26
APOC1-208ENST00000592535 KLK3P07288 261 aaPredicted RBP13.4□□□□□ -0.26
APOC1-208ENST00000592535 CYP2A7P20853 494 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms