RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 UBAP2Q5T6F2 1119 aaKnown RBP11.18□□□□□ -0.62
VMP1-211ENST00000591315 OTOAQ7RTW8 1153 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 PRSS42Q7Z5A4 293 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 TAX1BP1Q86VP1 789 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 AMIGO1Q86WK6 493 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 OOSP2Q86WS3 158 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 SPACA3Q8IXA5 215 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 ZBED8Q8IZ13 594 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 LSMEM2Q8N112 164 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 ZBTB2Q8N680 514 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 LRRN4CLQ8ND94 238 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 OR5K2Q8NHB8 316 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 FBXO25Q8TCJ0 367 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 ZFPM2Q8WW38 1151 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 KLHL6Q8WZ60 621 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 ZDHHC12Q96GR4 267 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 PANX3Q96QZ0 392 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 GPR21Q99679 349 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 AARSD1Q9BTE6 412 aaKnown RBP11.18□□□□□ -0.62
VMP1-211ENST00000591315 TSSK1BQ9BXA7 367 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 TRIT1Q9H3H1 467 aaKnown RBP11.18□□□□□ -0.62
VMP1-211ENST00000591315 ZNF768Q9H5H4 540 aaKnown RBP11.18□□□□□ -0.62
VMP1-211ENST00000591315 TFB2MQ9H5Q4 396 aaKnown RBP11.18□□□□□ -0.62
VMP1-211ENST00000591315 DMGDHQ9UI17 866 aaKnown RBP11.18□□□□□ -0.62
VMP1-211ENST00000591315 IGSF10Q6WRI0 2623 aa11.18□□□□□ -0.62
VMP1-211ENST00000591315 TEX51A0A1B0GUA7 166 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 SLC9B1P1A6NJY1 282 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 CXorf49A8MYA2 514 aaPredicted RBP11.17□□□□□ -0.62
VMP1-211ENST00000591315 SMAPO00193 183 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 NVLO15381 856 aaKnown RBP11.17□□□□□ -0.62
VMP1-211ENST00000591315 TTC4O95801 387 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 ANKRD34CP0C6C1 535 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 EBLN1P0CF75 366 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 FOLR1P15328 257 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 ZNF28P17035 718 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 SSTR1P30872 391 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 ADARP55265 1226 aaKnown RBP11.17□□□□□ -0.62
VMP1-211ENST00000591315 PCBP4P57723 403 aaKnown RBP11.17□□□□□ -0.62
VMP1-211ENST00000591315 MC2RQ01718 297 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 CALCOCO2Q13137 446 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 CLN3Q13286 438 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 TMED2Q15363 201 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 PLEKHS1Q5SXH7 462 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 C8orf74Q6P047 294 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 CCDC25Q86WR0 208 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 CNTN4Q8IWV2 1026 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 TBC1D21Q8IYX1 336 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 LINC01555Q8NAE3 123 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 FLVCR1-AS1Q8TAF5 88 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 SKA2Q8WVK7 121 aaPredicted RBP11.17□□□□□ -0.62
VMP1-211ENST00000591315 TAAR9Q96RI9 348 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 FAM167BQ9BTA0 163 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 NAT9Q9BTE0 207 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 MENTQ9BUN1 341 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 RAB33BQ9H082 229 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 PPANQ9NQ55 473 aaKnown RBP11.17□□□□□ -0.62
VMP1-211ENST00000591315 WDR70Q9NW82 654 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 ACTR10Q9NZ32 417 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 AKAP7Q9P0M2 348 aaPredicted RBP11.17□□□□□ -0.62
VMP1-211ENST00000591315 SEMA5BQ9P283 1151 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 POMT2Q9UKY4 750 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 KLHL20Q9Y2M5 609 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 UTP11Q9Y3A2 253 aaKnown RBP11.17□□□□□ -0.62
VMP1-211ENST00000591315 PCDHGA7Q9Y5G6 932 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 PCM1Q15154 2024 aa11.17□□□□□ -0.62
VMP1-211ENST00000591315 ATRXP46100 2492 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 FAM208BQ5VWN6 2430 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 ATMQ13315 3056 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 A0A087WV48 116 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 B4E171 279 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 E5RI56 91 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 F8W8V4 182 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 H3BMM5 538 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 KLK10O43240 276 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 CHRM5P08912 532 aaPredicted RBP11.16□□□□□ -0.62
VMP1-211ENST00000591315 ST6GAL1P15907 406 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 NELFEP18615 380 aaKnown RBP11.16□□□□□ -0.62
VMP1-211ENST00000591315 MCM3P25205 808 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 PRDX3P30048 256 aaKnown RBP11.16□□□□□ -0.62
VMP1-211ENST00000591315 PKLRP30613 574 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 TSPAN7P41732 249 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 GPX6P59796 221 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 PLOD1Q02809 727 aaPredicted RBP11.16□□□□□ -0.62
VMP1-211ENST00000591315 GUCY2DQ02846 1103 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 TLE3Q04726 772 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 FOXM1Q08050 763 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 CBLBQ13191 982 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 KYNUQ16719 465 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 COL28A1Q2UY09 1125 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 KLHL38Q2WGJ6 581 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.16□□□□□ -0.62
VMP1-211ENST00000591315 ARMC6Q6NXE6 501 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 KLHL35Q6PF15 583 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 PIWIL4Q7Z3Z4 852 aaKnown RBP11.16□□□□□ -0.62
VMP1-211ENST00000591315 VASH2Q86V25 355 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 CPNE9Q8IYJ1 553 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 MMGT1Q8N4V1 131 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 BBOF1Q8ND07 529 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 ZNF248Q8NDW4 579 aa11.16□□□□□ -0.62
VMP1-211ENST00000591315 CD200R1Q8TD46 325 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms