RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 SPTBP11277 2137 aa10.91□□□□□ -0.66
SMAD4-211ENST00000590499 BSNQ9UPA5 3926 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 CD3EAPO15446 510 aaKnown RBP10.9□□□□□ -0.66
SMAD4-211ENST00000590499 OR56A5P0C7T3 313 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 ACADLP28330 430 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 NDUFS1P28331 727 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 ADH6P28332 368 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 ARCN1P48444 511 aaKnown RBP10.9□□□□□ -0.66
SMAD4-211ENST00000590499 TERF1P54274 439 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 UCNP55089 124 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 TMPRSS3P57727 454 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 SARNPP82979 210 aaKnown RBP10.9□□□□□ -0.66
SMAD4-211ENST00000590499 BOP1Q14137 746 aaKnown RBP10.9□□□□□ -0.66
SMAD4-211ENST00000590499 PLCL1Q15111 1095 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 TYSND1Q2T9J0 566 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 AARS2Q5JTZ9 985 aaKnown RBP10.9□□□□□ -0.66
SMAD4-211ENST00000590499 RNASEH2BQ5TBB1 312 aaKnown RBP10.9□□□□□ -0.66
SMAD4-211ENST00000590499 TMEM164Q5U3C3 297 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 ANKS6Q68DC2 871 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 KIAA0930Q6ICG6 404 aaPredicted RBP10.9□□□□□ -0.66
SMAD4-211ENST00000590499 CES3Q6UWW8 571 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 ACVR1CQ8NER5 493 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 ELMO1Q92556 727 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 ZDHHC12Q96GR4 267 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 SLC41A2Q96JW4 573 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 TTC1Q99614 292 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 NAPGQ99747 312 aaPredicted RBP10.9□□□□□ -0.66
SMAD4-211ENST00000590499 TRIM56Q9BRZ2 755 aaKnown RBP10.9□□□□□ -0.66
SMAD4-211ENST00000590499 P2RY12Q9H244 342 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 MVB12BQ9H7P6 319 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 XAB2Q9HCS7 855 aaKnown RBP10.9□□□□□ -0.66
SMAD4-211ENST00000590499 APMAPQ9HDC9 416 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 KCND1Q9NSA2 647 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 PCYOX1Q9UHG3 505 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 CDYLQ9Y232 598 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 COLEC10Q9Y6Z7 277 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 CFAP46Q8IYW2 2715 aa10.9□□□□□ -0.66
SMAD4-211ENST00000590499 BOD1L1Q8NFC6 3051 aa10.9□□□□□ -0.67
SMAD4-211ENST00000590499 PIEZO2Q9H5I5 2752 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 SEC16AO15027 2179 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 FAM237BA0A1B0GVD1 139 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 STMND1H3BQB6 276 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 IFRD1O00458 451 aaPredicted RBP10.89□□□□□ -0.67
SMAD4-211ENST00000590499 PRMT5O14744 637 aaPredicted RBP10.89□□□□□ -0.67
SMAD4-211ENST00000590499 GPC4O75487 556 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 VAPBO95292 243 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 RPS3P23396 243 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMAD4-211ENST00000590499 IVDP26440 423 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 CCR7P32248 378 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 TTPAP49638 278 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 SRSF6Q13247 344 aaKnown RBP10.89□□□□□ -0.67
SMAD4-211ENST00000590499 PTK6Q13882 451 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 DCAF12Q5T6F0 453 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 CACHD1Q5VU97 1274 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 BROXQ5VW32 411 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 IRGCQ6NXR0 463 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 KLHL35Q6PF15 583 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 NAPRTQ6XQN6 538 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 FAM92BQ6ZTR7 304 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 TMEM135Q86UB9 458 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 OOSP2Q86WS3 158 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 TFGQ92734 400 aaPredicted RBP10.89□□□□□ -0.67
SMAD4-211ENST00000590499 FCRL3Q96P31 734 aaPredicted RBP10.89□□□□□ -0.67
SMAD4-211ENST00000590499 TEFMQ96QE5 360 aaKnown RBP10.89□□□□□ -0.67
SMAD4-211ENST00000590499 CD180Q99467 661 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 NRTNQ99748 197 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 ZPBPQ9BS86 351 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 CARD6Q9BX69 1037 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 ASPSCR1Q9BZE9 553 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 TWSG1Q9GZX9 223 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 TFB2MQ9H5Q4 396 aaKnown RBP10.89□□□□□ -0.67
SMAD4-211ENST00000590499 CPNE5Q9HCH3 593 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 HRASLS2Q9NWW9 162 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 GPC6Q9Y625 555 aaPredicted RBP10.89□□□□□ -0.67
SMAD4-211ENST00000590499 SAR1BQ9Y6B6 198 aa10.89□□□□□ -0.67
SMAD4-211ENST00000590499 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.89□□□□□ -0.67
SMAD4-211ENST00000590499 IGHV5-51A0A0C4DH38 117 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 ZCWPW2A0A1B0GU75 182 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 OR6C74A6NCV1 312 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 TLCD2A6NGC4 264 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 SDR42E2A6NKP2 422 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 IQCF5A8MTL0 148 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 F8W8V4 182 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 GOLGA8MH3BSY2 632 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 K7ENP7 123 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 RASSF9O75901 435 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 TPBGLP0DKB5 382 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 NELFEP18615 380 aaKnown RBP10.88□□□□□ -0.67
SMAD4-211ENST00000590499 AOAHP28039 575 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 PPARGP37231 505 aaPredicted RBP10.88□□□□□ -0.67
SMAD4-211ENST00000590499 SEPHS1P49903 392 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 KPNA2P52292 529 aaKnown RBP10.88□□□□□ -0.67
SMAD4-211ENST00000590499 CXADRP78310 365 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 PLOD1Q02809 727 aaPredicted RBP10.88□□□□□ -0.67
SMAD4-211ENST00000590499 PPP1R7Q15435 360 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 ANKRD20A4Q4UJ75 823 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 CTSL3PQ5NE16 218 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 ZNF468Q5VIY5 522 aaPredicted RBP10.88□□□□□ -0.67
SMAD4-211ENST00000590499 ZNF449Q6P9G9 518 aa10.88□□□□□ -0.67
SMAD4-211ENST00000590499 INO80CQ6PI98 192 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms