RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 OR2L2Q8NH16 312 aa13.71□□□□□ -0.21
SAFB2-205ENST00000590000 PRR7Q8TB68 274 aa13.71□□□□□ -0.21
SAFB2-205ENST00000590000 PDLIM2Q96JY6 352 aa13.71□□□□□ -0.21
SAFB2-205ENST00000590000 PPP1R2P1Q96PQ5 205 aa13.71□□□□□ -0.21
SAFB2-205ENST00000590000 LRRC40Q9H9A6 602 aa13.71□□□□□ -0.21
SAFB2-205ENST00000590000 FAM60AQ9NP50 221 aa13.71□□□□□ -0.21
SAFB2-205ENST00000590000 SNX7Q9UNH6 387 aa13.71□□□□□ -0.21
SAFB2-205ENST00000590000 JRKLQ9Y4A0 524 aa13.71□□□□□ -0.21
SAFB2-205ENST00000590000 ZNF451Q9Y4E5 1061 aa13.71□□□□□ -0.21
SAFB2-205ENST00000590000 CSAG2Q9Y5P2 127 aa13.71□□□□□ -0.21
SAFB2-205ENST00000590000 DNMT3AQ9Y6K1 912 aaPredicted RBP13.71□□□□□ -0.21
SAFB2-205ENST00000590000 OTOGQ6ZRI0 2925 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 NUP210LQ5VU65 1888 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 AGAP14A8MT82 685 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 BTN3A1O00481 513 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 LDB2O43679 373 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 CRTAMO95727 393 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 AP2A1O95782 977 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 PRSS56P0CW18 603 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 TPBGLP0DKB5 382 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 CBSLP0DN79 551 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 PDHA2P29803 388 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 CBSP35520 551 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 FDFT1P37268 417 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 CDKN1CP49918 316 aaPredicted RBP13.7□□□□□ -0.22
SAFB2-205ENST00000590000 POU6F1Q14863 301 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 ZIC1Q15915 447 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 CCDC38Q502W7 563 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 ZDHHC20Q5W0Z9 365 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 CDHR3Q6ZTQ4 885 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 GSTA5Q7RTV2 222 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 MAMDC2Q7Z304 686 aaPredicted RBP13.7□□□□□ -0.22
SAFB2-205ENST00000590000 CISD2Q8N5K1 135 aaKnown RBP13.7□□□□□ -0.22
SAFB2-205ENST00000590000 PRELID2Q8N945 189 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 CCDC89Q8N998 374 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 COG1Q8WTW3 980 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 PNPLA2Q96AD5 504 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 TRAPPC9Q96Q05 1148 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 AP1M1Q9BXS5 423 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 PITPNM3Q9BZ71 974 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 ASB8Q9H765 288 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 RAB6BQ9NRW1 208 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 SOHLH2Q9NX45 425 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 PYCARDQ9ULZ3 195 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 SVILO95425 2214 aa13.7□□□□□ -0.22
SAFB2-205ENST00000590000 PDZD2O15018 2839 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 ZGRF1Q86YA3 2104 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 TMEM150CB9EJG8 249 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 E7EVH7 732 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 SRP72O76094 671 aaKnown RBP13.69□□□□□ -0.22
SAFB2-205ENST00000590000 PRAMEF1O95521 474 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 PRDX3P30048 256 aaKnown RBP13.69□□□□□ -0.22
SAFB2-205ENST00000590000 ARL4DP49703 201 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 ZNF140P52738 457 aaPredicted RBP13.69□□□□□ -0.22
SAFB2-205ENST00000590000 NCF4Q15080 339 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 TRIP13Q15645 432 aaPredicted RBP13.69□□□□□ -0.22
SAFB2-205ENST00000590000 BCL7AQ4VC05 210 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 KLHL35Q6PF15 583 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 DRICH1Q6PGQ1 229 aaPredicted RBP13.69□□□□□ -0.22
SAFB2-205ENST00000590000 PPP1R21Q6ZMI0 780 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 TRIM73Q86UV7 250 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 ADGRF3Q8IZF5 1079 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 DNAAF3Q8N9W5 541 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 PHC3Q8NDX5 983 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 FLVCR1-AS1Q8TAF5 88 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 MAIP1Q8WWC4 291 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 SEC14L1Q92503 715 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 LRRC45Q96CN5 670 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 PBKQ96KB5 322 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 DNAJC1Q96KC8 554 aaKnown RBP13.69□□□□□ -0.22
SAFB2-205ENST00000590000 LINC00615Q96LM1 132 aaPredicted RBP13.69□□□□□ -0.22
SAFB2-205ENST00000590000 TTC25Q96NG3 672 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 BARD1Q99728 777 aaKnown RBP13.69□□□□□ -0.22
SAFB2-205ENST00000590000 OR52A5Q9H2C5 316 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 XKR8Q9H6D3 395 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 ZNF552Q9H707 407 aaPredicted RBP13.69□□□□□ -0.22
SAFB2-205ENST00000590000 ACTR5Q9H9F9 607 aaPredicted RBP13.69□□□□□ -0.22
SAFB2-205ENST00000590000 PCDHGB7Q9Y5F8 929 aa13.69□□□□□ -0.22
SAFB2-205ENST00000590000 ZNF749O43361 778 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 DPM1O60762 260 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 MSH3P20585 1137 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 CDH3P22223 829 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 ITGA9Q13797 1035 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 GSE1Q14687 1217 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 DEFB110Q30KQ9 67 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 TAS2R42Q7RTR8 314 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 MRGPREQ86SM8 312 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 CFAP206Q8IYR0 622 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 RASGEF1CQ8N431 466 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 OR52E1Q8NGJ3 308 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 OR8K5Q8NH50 307 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 CPT1BQ92523 772 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 CLIP3Q96DZ5 547 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 SLAMF7Q9NQ25 335 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 C1GALT1Q9NS00 363 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 SLC22A11Q9NSA0 550 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 GPR83Q9NYM4 423 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 PAK5Q9P286 719 aa13.68□□□□□ -0.22
SAFB2-205ENST00000590000 FEZ2Q9UHY8 353 aaPredicted RBP13.68□□□□□ -0.22
SAFB2-205ENST00000590000 KIF5CO60282 957 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms