RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 GSTM4Q03013 218 aa17.41■□□□□ 0.38
H3F3B-209ENST00000589949 ACVR1Q04771 509 aa17.41■□□□□ 0.38
H3F3B-209ENST00000589949 ITIH4Q14624 930 aa17.41■□□□□ 0.38
H3F3B-209ENST00000589949 KCTD19Q17RG1 926 aaPredicted RBP17.41■□□□□ 0.38
H3F3B-209ENST00000589949 NADK2Q4G0N4 442 aa17.41■□□□□ 0.38
H3F3B-209ENST00000589949 TSTD2Q5T7W7 516 aa17.41■□□□□ 0.38
H3F3B-209ENST00000589949 VRK3Q8IV63 474 aa17.41■□□□□ 0.38
H3F3B-209ENST00000589949 FAM20CQ8IXL6 584 aa17.41■□□□□ 0.38
H3F3B-209ENST00000589949 ZBTB2Q8N680 514 aa17.41■□□□□ 0.38
H3F3B-209ENST00000589949 SPC24Q8NBT2 197 aa17.41■□□□□ 0.38
H3F3B-209ENST00000589949 SPRTNQ9H040 489 aaPredicted RBP17.41■□□□□ 0.38
H3F3B-209ENST00000589949 FANCEQ9HB96 536 aa17.41■□□□□ 0.38
H3F3B-209ENST00000589949 ASF1AQ9Y294 204 aa17.41■□□□□ 0.38
H3F3B-209ENST00000589949 LRRK2Q5S007 2527 aa17.41■□□□□ 0.38
H3F3B-209ENST00000589949 CEACAM4O75871 244 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 ZSCAN5DPP0CG00 497 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 CBSLP0DN79 551 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 CCR7P32248 378 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 CBSP35520 551 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 CSE1LP55060 971 aaKnown RBP17.4■□□□□ 0.38
H3F3B-209ENST00000589949 FOXL2P58012 376 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 CDH17Q12864 832 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 SNX1Q13596 522 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 PAPD7Q5XG87 772 aaKnown RBP17.4■□□□□ 0.38
H3F3B-209ENST00000589949 LINC00523Q86TU6 105 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 TBC1D21Q8IYX1 336 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 C19orf47Q8N9M1 422 aaKnown RBP17.4■□□□□ 0.38
H3F3B-209ENST00000589949 DNAAF3Q8N9W5 541 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 SEC14L1Q92503 715 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 MENTQ9BUN1 341 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 SLC25A23Q9BV35 468 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 SYTL2Q9HCH5 934 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 CASS4Q9NQ75 786 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 ANKMY1Q9P2S6 941 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 SERTAD3Q9UJW9 196 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 SNX7Q9UNH6 387 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 CDYLQ9Y232 598 aa17.4■□□□□ 0.38
H3F3B-209ENST00000589949 TDRKHQ9Y2W6 561 aaKnown RBP17.4■□□□□ 0.38
H3F3B-209ENST00000589949 UTP20O75691 2785 aaKnown RBP17.4■□□□□ 0.38
H3F3B-209ENST00000589949 IQCF5A8MTL0 148 aa17.39■□□□□ 0.37
H3F3B-209ENST00000589949 E7EQ34 232 aa17.39■□□□□ 0.37
H3F3B-209ENST00000589949 KLF7O75840 302 aaPredicted RBP17.39■□□□□ 0.37
H3F3B-209ENST00000589949 IFNB1P01574 187 aa17.39■□□□□ 0.37
H3F3B-209ENST00000589949 FTH1P02794 183 aa17.39■□□□□ 0.37
H3F3B-209ENST00000589949 STIP1P31948 543 aaKnown RBP17.39■□□□□ 0.37
H3F3B-209ENST00000589949 SHMT2P34897 504 aa17.39■□□□□ 0.37
H3F3B-209ENST00000589949 UQCRFS1P47985 274 aa17.39■□□□□ 0.37
H3F3B-209ENST00000589949 NCF4Q15080 339 aa17.39■□□□□ 0.37
H3F3B-209ENST00000589949 SIX1Q15475 284 aaPredicted RBP17.39■□□□□ 0.37
H3F3B-209ENST00000589949 ZNF449Q6P9G9 518 aa17.39■□□□□ 0.37
H3F3B-209ENST00000589949 LDB1Q86U70 411 aaPredicted RBP17.39■□□□□ 0.37
H3F3B-209ENST00000589949 SLC13A5Q86YT5 568 aaPredicted RBP17.39■□□□□ 0.37
H3F3B-209ENST00000589949 OR5K2Q8NHB8 316 aa17.39■□□□□ 0.37
H3F3B-209ENST00000589949 ALS2CR12Q96Q35 445 aa17.39■□□□□ 0.37
H3F3B-209ENST00000589949 RANBP9Q96S59 729 aa17.39■□□□□ 0.37
H3F3B-209ENST00000589949 ACSS2Q9NR19 701 aa17.39■□□□□ 0.37
H3F3B-209ENST00000589949 MARCH4Q9P2E8 410 aaPredicted RBP17.39■□□□□ 0.37
H3F3B-209ENST00000589949 CIDEBQ9UHD4 219 aa17.39■□□□□ 0.37
H3F3B-209ENST00000589949 KLHL20Q9Y2M5 609 aa17.39■□□□□ 0.37
H3F3B-209ENST00000589949 PCDHGA9Q9Y5G4 932 aaKnown RBP17.39■□□□□ 0.37
H3F3B-209ENST00000589949 USP9XQ93008 2570 aaPredicted RBP17.39■□□□□ 0.37
H3F3B-209ENST00000589949 SNRNP200O75643 2136 aaKnown RBP17.39■□□□□ 0.37
H3F3B-209ENST00000589949 NAV2Q8IVL1 2488 aa17.38■□□□□ 0.37
H3F3B-209ENST00000589949 HEATR9A2RTY3 570 aa17.38■□□□□ 0.37
H3F3B-209ENST00000589949 ERI2A8K979 691 aaKnown RBP17.38■□□□□ 0.37
H3F3B-209ENST00000589949 CNOT3O75175 753 aaKnown RBP17.38■□□□□ 0.37
H3F3B-209ENST00000589949 TMEM63AO94886 807 aa17.38■□□□□ 0.37
H3F3B-209ENST00000589949 ATXN8OSP0DMR3 200 aa17.38■□□□□ 0.37
H3F3B-209ENST00000589949 PGDP52209 483 aa17.38■□□□□ 0.37
H3F3B-209ENST00000589949 ATP1A4Q13733 1029 aa17.38■□□□□ 0.37
H3F3B-209ENST00000589949 GRB7Q14451 532 aa17.38■□□□□ 0.37
H3F3B-209ENST00000589949 C1orf189Q5VU69 101 aa17.38■□□□□ 0.37
H3F3B-209ENST00000589949 LINC01555Q8NAE3 123 aa17.38■□□□□ 0.37
H3F3B-209ENST00000589949 FDCSPQ8NFU4 85 aa17.38■□□□□ 0.37
H3F3B-209ENST00000589949 NUDT9Q9BW91 350 aa17.38■□□□□ 0.37
H3F3B-209ENST00000589949 RAB6BQ9NRW1 208 aa17.38■□□□□ 0.37
H3F3B-209ENST00000589949 RIMKLBQ9ULI2 386 aa17.38■□□□□ 0.37
H3F3B-209ENST00000589949 ZNF148Q9UQR1 794 aa17.38■□□□□ 0.37
H3F3B-209ENST00000589949 MASP2O00187 686 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 ZNF185O15231 689 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 SORBS2O94875 1100 aaKnown RBP17.37■□□□□ 0.37
H3F3B-209ENST00000589949 OR56A5P0C7T3 313 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 ADRA1DP25100 572 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 FDFT1P37268 417 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 AFTPHQ6ULP2 937 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 PPP1R21Q6ZMI0 780 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 SLC22A15Q8IZD6 547 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 KRT222Q8N1A0 295 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 DNAJC22Q8N4W6 341 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 RNF10Q8N5U6 811 aaKnown RBP17.37■□□□□ 0.37
H3F3B-209ENST00000589949 OR4L1Q8NH43 312 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 TCTN2Q96GX1 697 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 GBP5Q96PP8 586 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 AP1M1Q9BXS5 423 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 CHRAC1Q9NRG0 131 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 OR6C2Q9NZP2 312 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 DHCR7Q9UBM7 475 aaKnown RBP17.37■□□□□ 0.37
H3F3B-209ENST00000589949 POLG2Q9UHN1 485 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 GUCA1BQ9UMX6 200 aa17.37■□□□□ 0.37
H3F3B-209ENST00000589949 TCAF1Q9Y4C2 921 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms