RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 BRD3Q15059 726 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 RNASEH2BQ5TBB1 312 aaKnown RBP10.1□□□□□ -0.79
SDF2-208ENST00000589788 IZUMO3Q5VZ72 239 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 PTRHD1Q6GMV3 140 aaKnown RBP10.1□□□□□ -0.79
SDF2-208ENST00000589788 KIAA0930Q6ICG6 404 aaPredicted RBP10.1□□□□□ -0.79
SDF2-208ENST00000589788 CAPRIN2Q6IMN6 1127 aaKnown RBP10.1□□□□□ -0.79
SDF2-208ENST00000589788 ARMC6Q6NXE6 501 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 IRGCQ6NXR0 463 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 C8orf74Q6P047 294 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 MAATS1Q7Z4T9 603 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 CLEC14AQ86T13 490 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 LDB1Q86U70 411 aaPredicted RBP10.1□□□□□ -0.79
SDF2-208ENST00000589788 FAM129CQ86XR2 697 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 NAT8LQ8N9F0 302 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 HNRNPLLQ8WVV9 542 aaKnown RBP10.1□□□□□ -0.79
SDF2-208ENST00000589788 KCNE4Q8WWG9 221 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 JPH3Q8WXH2 748 aaPredicted RBP10.1□□□□□ -0.79
SDF2-208ENST00000589788 RSC1A1Q92681 617 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 USP7Q93009 1102 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 ZNF669Q96BR6 464 aaPredicted RBP10.1□□□□□ -0.79
SDF2-208ENST00000589788 ZDHHC12Q96GR4 267 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 FERD3LQ96RJ6 166 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 OR52A5Q9H2C5 316 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 KIR3DX1Q9H7L2 352 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 OGFRQ9NZT2 677 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 PCDHGA7Q9Y5G6 932 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 RPS6KL1Q9Y6S9 549 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 MN1Q10571 1320 aaPredicted RBP10.1□□□□□ -0.79
SDF2-208ENST00000589788 SPEGQ15772 3267 aa10.1□□□□□ -0.79
SDF2-208ENST00000589788 UBA6A0AVT1 1052 aaPredicted RBP10.09□□□□□ -0.79
SDF2-208ENST00000589788 EFCAB7A8K855 629 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 GOLGA8KD6RF30 607 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 GOLGA8TH3BQL2 631 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 DNALI1O14645 258 aaPredicted RBP10.09□□□□□ -0.79
SDF2-208ENST00000589788 NVLO15381 856 aaKnown RBP10.09□□□□□ -0.79
SDF2-208ENST00000589788 RAD51CO43502 376 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 FGF3P11487 239 aaPredicted RBP10.09□□□□□ -0.79
SDF2-208ENST00000589788 CCL4P13236 92 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 ACPPP15309 386 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 ITGB6P18564 788 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 PDHA2P29803 388 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 ETV5P41161 510 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 ABCG1P45844 678 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 GFERP55789 205 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 THOC5Q13769 683 aaKnown RBP10.09□□□□□ -0.79
SDF2-208ENST00000589788 TMED2Q15363 201 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 ANKRD20A4Q4UJ75 823 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 ZNF658BQ4V348 819 aaPredicted RBP10.09□□□□□ -0.79
SDF2-208ENST00000589788 DNAJC21Q5F1R6 531 aaKnown RBP10.09□□□□□ -0.79
SDF2-208ENST00000589788 RNF187Q5TA31 235 aaPredicted RBP10.09□□□□□ -0.79
SDF2-208ENST00000589788 BROXQ5VW32 411 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 NEPROQ6NW34 567 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 C19orf48Q6RUI8 117 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 NXPE4Q6UWF7 544 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 PDZD3Q86UT5 571 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 HOOK3Q86VS8 718 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 OOSP2Q86WS3 158 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 LRRC6Q86X45 466 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 ACVR1CQ8NER5 493 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 GSDMBQ8TAX9 411 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 TFGQ92734 400 aaPredicted RBP10.09□□□□□ -0.79
SDF2-208ENST00000589788 ART4Q93070 314 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 STAMBPL1Q96FJ0 436 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 C9orf72Q96LT7 481 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 TAAR9Q96RI9 348 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 TCF12Q99081 682 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 MVB12BQ9H7P6 319 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 SLC39A1Q9NY26 324 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 SLC24A2Q9UI40 661 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 GNPTGQ9UJJ9 305 aa10.09□□□□□ -0.79
SDF2-208ENST00000589788 KMT2BQ9UMN6 2715 aaPredicted RBP10.09□□□□□ -0.79
SDF2-208ENST00000589788 OR6C74A6NCV1 312 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 B4E171 279 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 KPNA5O15131 536 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 TOX3O15405 576 aaPredicted RBP10.08□□□□□ -0.8
SDF2-208ENST00000589788 TTI1O43156 1089 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 PRAMEF10O60809 474 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 KRT37O76014 449 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 C9P02748 559 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 APOA4P06727 396 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 ANKRD34CP0C6C1 535 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 EDN3P14138 238 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 OGNP20774 298 aaKnown RBP10.08□□□□□ -0.8
SDF2-208ENST00000589788 ARNTP27540 789 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 TSPAN7P41732 249 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 MAGEA3P43357 314 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 LEPRP48357 1165 aaKnown RBP10.08□□□□□ -0.8
SDF2-208ENST00000589788 CSE1LP55060 971 aaKnown RBP10.08□□□□□ -0.8
SDF2-208ENST00000589788 EIF3BP55884 814 aaKnown RBP10.08□□□□□ -0.8
SDF2-208ENST00000589788 HSPA14Q0VDF9 509 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 PRKAA1Q13131 559 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 TEX35Q5T0J7 233 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 DCAF12Q5T6F0 453 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 CACHD1Q5VU97 1274 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 ZNF470Q6ECI4 717 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 NAPRTQ6XQN6 538 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 FAM92BQ6ZTR7 304 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 ARHGAP22Q7Z5H3 698 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 SPACA3Q8IXA5 215 aa10.08□□□□□ -0.8
SDF2-208ENST00000589788 PHC3Q8NDX5 983 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms