RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 SHDQ96IW2 340 aa11.78□□□□□ -0.52
CCBE1-203ENST00000589116 CCDC138Q96M89 665 aa11.78□□□□□ -0.52
CCBE1-203ENST00000589116 LGR4Q9BXB1 951 aa11.78□□□□□ -0.52
CCBE1-203ENST00000589116 LRMDAQ9H2I8 198 aa11.78□□□□□ -0.52
CCBE1-203ENST00000589116 SLC32A1Q9H598 525 aa11.78□□□□□ -0.52
CCBE1-203ENST00000589116 IPPKQ9H8X2 491 aa11.78□□□□□ -0.52
CCBE1-203ENST00000589116 ITM2CQ9NQX7 267 aa11.78□□□□□ -0.52
CCBE1-203ENST00000589116 ARL8BQ9NVJ2 186 aa11.78□□□□□ -0.52
CCBE1-203ENST00000589116 WNT16Q9UBV4 365 aa11.78□□□□□ -0.52
CCBE1-203ENST00000589116 TAGLN3Q9UI15 199 aa11.78□□□□□ -0.52
CCBE1-203ENST00000589116 ZNF225Q9UK10 706 aa11.78□□□□□ -0.52
CCBE1-203ENST00000589116 TMEM98Q9Y2Y6 226 aa11.78□□□□□ -0.52
CCBE1-203ENST00000589116 CAPN7Q9Y6W3 813 aa11.78□□□□□ -0.52
CCBE1-203ENST00000589116 NUMA1Q14980 2115 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 MED19A0JLT2 244 aaPredicted RBP11.77□□□□□ -0.53
CCBE1-203ENST00000589116 PRR5-ARHGAP8B1AHC4 643 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 OR7A17O14581 309 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 ESRRAP11474 423 aaPredicted RBP11.77□□□□□ -0.53
CCBE1-203ENST00000589116 FOXA1P55317 472 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 IRX1P78414 480 aaPredicted RBP11.77□□□□□ -0.53
CCBE1-203ENST00000589116 ABRQ12979 859 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 TRAF3Q13114 568 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 UBAP2LQ14157 1087 aaKnown RBP11.77□□□□□ -0.53
CCBE1-203ENST00000589116 C18orf21Q32NC0 220 aaPredicted RBP11.77□□□□□ -0.53
CCBE1-203ENST00000589116 DOK6Q6PKX4 331 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 UNC5DQ6UXZ4 953 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 MBOAT1Q6ZNC8 495 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 RNF165Q6ZSG1 346 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 TREML1Q86YW5 311 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 KLHDC8AQ8IYD2 350 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 LILRA3Q8N6C8 439 aaPredicted RBP11.77□□□□□ -0.53
CCBE1-203ENST00000589116 OR52B6Q8NGF0 335 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 HMGB4Q8WW32 186 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 KLK6Q92876 244 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 ATP6V1E2Q96A05 226 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 PPP1R36Q96LQ0 422 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 NTMT1Q9BV86 223 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 ZNF385DQ9H6B1 395 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 KLC4Q9NSK0 619 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 CA14Q9ULX7 337 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 SLC17A4Q9Y2C5 497 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 OR1A2Q9Y585 309 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 ST14Q9Y5Y6 855 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 DOCK9Q9BZ29 2069 aa11.77□□□□□ -0.53
CCBE1-203ENST00000589116 CACNA1HO95180 2353 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 A0A1B0GTL3 188 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 CACNB4O00305 520 aaPredicted RBP11.76□□□□□ -0.53
CCBE1-203ENST00000589116 PIP5K1BO14986 540 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 KCNJ13O60928 360 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 OR4F21O95013 312 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 EBLN1P0CF75 366 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 PTPN4P29074 926 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 PDHA2P29803 388 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 PRDX3P30048 256 aaKnown RBP11.76□□□□□ -0.53
CCBE1-203ENST00000589116 MNAT1P51948 309 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 STARD6P59095 220 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 KIAA1024LP59773 190 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 ERVPABLB-1P60509 514 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 DMPKQ09013 629 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.76□□□□□ -0.53
CCBE1-203ENST00000589116 LETMD1Q6P1Q0 360 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 XKR5Q6UX68 686 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 Q6ZS52 159 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 CHSY3Q70JA7 882 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 LARP4Q71RC2 724 aaKnown RBP eCLIP11.76□□□□□ -0.53
CCBE1-203ENST00000589116 PDZD3Q86UT5 571 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 FAM124AQ86V42 546 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 MAGEC3Q8TD91 643 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 SLC7A6OSQ96CW6 309 aaPredicted RBP11.76□□□□□ -0.53
CCBE1-203ENST00000589116 CMTM5Q96DZ9 223 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 MAGEB10Q96LZ2 347 aaPredicted RBP11.76□□□□□ -0.53
CCBE1-203ENST00000589116 KCNA7Q96RP8 456 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 NELL2Q99435 816 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 TIMM29Q9BSF4 260 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 APOOQ9BUR5 198 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 OR52A5Q9H2C5 316 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 LTB4R2Q9NPC1 389 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 TRPS1Q9UHF7 1281 aa11.76□□□□□ -0.53
CCBE1-203ENST00000589116 C10orf142B7Z368 130 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 SLC31A1O15431 190 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 WDR47O94967 919 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 C1orf105O95561 183 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 HNRNPA2B1P22626 353 aaKnown RBP11.75□□□□□ -0.53
CCBE1-203ENST00000589116 MAT2AP31153 395 aaKnown RBP11.75□□□□□ -0.53
CCBE1-203ENST00000589116 ACSL1P33121 698 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 ARL1P40616 181 aaPredicted RBP11.75□□□□□ -0.53
CCBE1-203ENST00000589116 NBL1P41271 181 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 GDF5P43026 501 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 ATP4BP51164 291 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 NUBP1P53384 320 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 KLF10Q13118 480 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 NFE2L1Q14494 772 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 PTCHD3Q3KNS1 767 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 PLA2G4EQ3MJ16 856 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 GGTA1PQ4G0N0 100 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 XKR7Q5GH72 579 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 DGLUCYQ7Z3D6 616 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 MILR1Q7Z6M3 343 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 DDIASQ8IXT1 998 aa11.75□□□□□ -0.53
CCBE1-203ENST00000589116 OR4F6Q8NGB9 312 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms