RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 OR2A14Q96R47 310 aa13.87□□□□□ -0.19
VMP1-206ENST00000587945 SLC25A23Q9BV35 468 aa13.87□□□□□ -0.19
VMP1-206ENST00000587945 NLNQ9BYT8 704 aa13.87□□□□□ -0.19
VMP1-206ENST00000587945 SLC7A5P2Q9GIP4 190 aa13.87□□□□□ -0.19
VMP1-206ENST00000587945 SPRTNQ9H040 489 aaPredicted RBP13.87□□□□□ -0.19
VMP1-206ENST00000587945 ACSS2Q9NR19 701 aa13.87□□□□□ -0.19
VMP1-206ENST00000587945 RAB6BQ9NRW1 208 aa13.87□□□□□ -0.19
VMP1-206ENST00000587945 TCFL5Q9UL49 500 aa13.87□□□□□ -0.19
VMP1-206ENST00000587945 GUCA1BQ9UMX6 200 aa13.87□□□□□ -0.19
VMP1-206ENST00000587945 HEATR9A2RTY3 570 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 ERI2A8K979 691 aaKnown RBP13.86□□□□□ -0.19
VMP1-206ENST00000587945 IQCF5A8MTL0 148 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 QSOX1O00391 747 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 GAS8O95995 478 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 CHRM5P08912 532 aaPredicted RBP13.86□□□□□ -0.19
VMP1-206ENST00000587945 MSL3P1P0C860 447 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 ZSCAN5DPP0CG00 497 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 CDC25BP30305 580 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 SHMT2P34897 504 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 PGDP52209 483 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 SEMA3AQ14563 771 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 KCTD19Q17RG1 926 aaPredicted RBP13.86□□□□□ -0.19
VMP1-206ENST00000587945 AFTPHQ6ULP2 937 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 LDB1Q86U70 411 aaPredicted RBP13.86□□□□□ -0.19
VMP1-206ENST00000587945 VRK3Q8IV63 474 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 TBC1D21Q8IYX1 336 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 RNF10Q8N5U6 811 aaKnown RBP13.86□□□□□ -0.19
VMP1-206ENST00000587945 C19orf47Q8N9M1 422 aaKnown RBP13.86□□□□□ -0.19
VMP1-206ENST00000587945 LMNTD1Q8N9Z9 388 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 FLVCR1-AS1Q8TAF5 88 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 LKAAEAR1Q8TD35 194 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 N4BP2L2Q92802 583 aaPredicted RBP13.86□□□□□ -0.19
VMP1-206ENST00000587945 MIB2Q96AX9 1013 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 CASS4Q9NQ75 786 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 CIDEBQ9UHD4 219 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 TCAF1Q9Y4C2 921 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 NBASA2RRP1 2371 aa13.86□□□□□ -0.19
VMP1-206ENST00000587945 APRTP07741 180 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 CBSLP0DN79 551 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 ADRA1DP25100 572 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 PEBP1P30086 187 aaKnown RBP13.85□□□□□ -0.19
VMP1-206ENST00000587945 CCR7P32248 378 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 CBSP35520 551 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 ACVR1Q04771 509 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 UBAP2LQ14157 1087 aaKnown RBP13.85□□□□□ -0.19
VMP1-206ENST00000587945 NCF4Q15080 339 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 NADK2Q4G0N4 442 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 C1orf189Q5VU69 101 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 LYPLAL1Q5VWZ2 237 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 ZNF385CQ66K41 422 aaPredicted RBP13.85□□□□□ -0.19
VMP1-206ENST00000587945 C2orf73Q8N5S3 287 aaPredicted RBP13.85□□□□□ -0.19
VMP1-206ENST00000587945 ZBTB2Q8N680 514 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 OR4L1Q8NH43 312 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 OR5K2Q8NHB8 316 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 TCTN2Q96GX1 697 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 RANBP9Q96S59 729 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 FRMD8P1Q9BZ68 369 aaPredicted RBP13.85□□□□□ -0.19
VMP1-206ENST00000587945 MARCH4Q9P2E8 410 aaPredicted RBP13.85□□□□□ -0.19
VMP1-206ENST00000587945 POLG2Q9UHN1 485 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 KLHL20Q9Y2M5 609 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 COL12A1Q99715 3063 aa13.85□□□□□ -0.19
VMP1-206ENST00000587945 A0A0J9YY10 115 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 A6NL46 340 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 TTLL8A6PVC2 850 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 ISM1B1AKI9 464 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 H3BMH7 237 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 ZNF185O15231 689 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 OR2B3O76000 313 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 TMEM63AO94886 807 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 RPL22P35268 128 aaKnown RBP13.84□□□□□ -0.19
VMP1-206ENST00000587945 GABRA4P48169 554 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 SESN2P58004 480 aaPredicted RBP13.84□□□□□ -0.19
VMP1-206ENST00000587945 FOXL2P58012 376 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 PRAMEP78395 509 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 CRADDP78560 199 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 PLOD1Q02809 727 aaPredicted RBP13.84□□□□□ -0.19
VMP1-206ENST00000587945 SRSF1Q07955 248 aaKnown RBP eCLIP13.84□□□□□ -0.19
VMP1-206ENST00000587945 HSPA14Q0VDF9 509 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 RPS6KA1Q15418 735 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 SIX1Q15475 284 aaPredicted RBP13.84□□□□□ -0.19
VMP1-206ENST00000587945 FASTKD1Q53R41 847 aaKnown RBP13.84□□□□□ -0.19
VMP1-206ENST00000587945 MLIPQ5VWP3 458 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 GPR135Q8IZ08 494 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 KRT222Q8N1A0 295 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 CCDC89Q8N998 374 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 FDCSPQ8NFU4 85 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 CFAP61Q8NHU2 1237 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 COL26A1Q96A83 441 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 IL17FQ96PD4 163 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 TTC1Q99614 292 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 AP1M1Q9BXS5 423 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 MLXIPLQ9NP71 852 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 CHRAC1Q9NRG0 131 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 OR6C2Q9NZP2 312 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 ANKMY1Q9P2S6 941 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 RIMKLBQ9ULI2 386 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 CDYLQ9Y232 598 aa13.84□□□□□ -0.19
VMP1-206ENST00000587945 PCDHGA9Q9Y5G4 932 aaKnown RBP13.84□□□□□ -0.19
VMP1-206ENST00000587945 C9J4A7 227 aa13.83□□□□□ -0.2
VMP1-206ENST00000587945 HBQ1P09105 142 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms