RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 ZNF385CQ66K41 422 aaPredicted RBP13.68□□□□□ -0.22
ERCC1-205ENST00000587888 CISD2Q8N5K1 135 aaKnown RBP13.68□□□□□ -0.22
ERCC1-205ENST00000587888 C19orf47Q8N9M1 422 aaKnown RBP13.68□□□□□ -0.22
ERCC1-205ENST00000587888 FAM71DQ8N9W8 422 aa13.68□□□□□ -0.22
ERCC1-205ENST00000587888 ELMO1Q92556 727 aa13.68□□□□□ -0.22
ERCC1-205ENST00000587888 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.68□□□□□ -0.22
ERCC1-205ENST00000587888 PNPLA2Q96AD5 504 aa13.68□□□□□ -0.22
ERCC1-205ENST00000587888 SMAD5Q99717 465 aaKnown RBP13.68□□□□□ -0.22
ERCC1-205ENST00000587888 C19orf43Q9BQ61 176 aa13.68□□□□□ -0.22
ERCC1-205ENST00000587888 IRAK4Q9NWZ3 460 aa13.68□□□□□ -0.22
ERCC1-205ENST00000587888 SPHK1Q9NYA1 384 aa13.68□□□□□ -0.22
ERCC1-205ENST00000587888 IFT80Q9P2H3 777 aaPredicted RBP13.68□□□□□ -0.22
ERCC1-205ENST00000587888 PTRH2Q9Y3E5 179 aaKnown RBP13.68□□□□□ -0.22
ERCC1-205ENST00000587888 PCSK5Q92824 1860 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 OR51F1A6NGY5 319 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 ISM1B1AKI9 464 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 H7C0S8 307 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 PEX12O00623 359 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 AP2A2O94973 939 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 METTL18O95568 372 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 CHRM5P08912 532 aaPredicted RBP13.67□□□□□ -0.22
ERCC1-205ENST00000587888 TPBGLP0DKB5 382 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 SHMT2P34897 504 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 PTPN7P35236 360 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 FOLR3P41439 243 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 FOXL2P58012 376 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 DCDP81605 110 aaKnown RBP13.67□□□□□ -0.22
ERCC1-205ENST00000587888 KCTD11Q693B1 232 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 HPS6Q86YV9 775 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 TMTC1Q8IUR5 882 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 ZNF655Q8N720 491 aaPredicted RBP13.67□□□□□ -0.22
ERCC1-205ENST00000587888 STYXQ8WUJ0 223 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 ALG3Q92685 438 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 SNRNP40Q96DI7 357 aaKnown RBP13.67□□□□□ -0.22
ERCC1-205ENST00000587888 FER1L6-AS2Q96M78 137 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 DHRS4Q9BTZ2 278 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 SLC29A3Q9BZD2 475 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 DHCR7Q9UBM7 475 aaKnown RBP13.67□□□□□ -0.22
ERCC1-205ENST00000587888 POLG2Q9UHN1 485 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 PLAGL1Q9UM63 463 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 CDYLQ9Y232 598 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 AP1M2Q9Y6Q5 423 aa13.67□□□□□ -0.22
ERCC1-205ENST00000587888 SOWAHDA6NJG2 315 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 LIN7AO14910 233 aaPredicted RBP13.66□□□□□ -0.22
ERCC1-205ENST00000587888 GSTM1P09488 218 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 ALAS2P22557 587 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 VARSP26640 1264 aaKnown RBP13.66□□□□□ -0.22
ERCC1-205ENST00000587888 CSE1LP55060 971 aaKnown RBP13.66□□□□□ -0.22
ERCC1-205ENST00000587888 GSTM4Q03013 218 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 NR6A1Q15406 480 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 CCDC38Q502W7 563 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 VWA5B1Q5TIE3 1220 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 RHBDD2Q6NTF9 364 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 MRGPREQ86SM8 312 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 FAM20CQ8IXL6 584 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 TBC1D21Q8IYX1 336 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 GALNT16Q8N428 558 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 CLEC1AQ8NC01 280 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 IP6K3Q96PC2 410 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 C17orf62Q9BQA9 187 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 LRRC40Q9H9A6 602 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 TXLNGQ9NUQ3 528 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 ASF1BQ9NVP2 202 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 CUEDC1Q9NWM3 386 aaPredicted RBP13.66□□□□□ -0.22
ERCC1-205ENST00000587888 C5AR2Q9P296 337 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 IMPACTQ9P2X3 320 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 NDOR1Q9UHB4 597 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 EPN1Q9Y6I3 576 aaPredicted RBP13.66□□□□□ -0.22
ERCC1-205ENST00000587888 CCDC88CQ9P219 2028 aa13.66□□□□□ -0.22
ERCC1-205ENST00000587888 SHANK1Q9Y566 2161 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 A0A0J9YY10 115 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 BHMG1C9JSJ3 638 aaPredicted RBP13.65□□□□□ -0.22
ERCC1-205ENST00000587888 H3BMH7 237 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 ZSCAN9O15535 394 aaPredicted RBP13.65□□□□□ -0.22
ERCC1-205ENST00000587888 FTH1P02794 183 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 CD63P08962 238 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 MSNP26038 577 aaKnown RBP13.65□□□□□ -0.22
ERCC1-205ENST00000587888 COL8A1P27658 744 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 ACADLP28330 430 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 NSG1P42857 185 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 GABRA4P48169 554 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 SYTL3Q4VX76 610 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 DCAF10Q5QP82 559 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 LYPLAL1Q5VWZ2 237 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 TMEM151BQ8IW70 566 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 IQCKQ8N0W5 287 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 DNAJC22Q8N4W6 341 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 FLVCR1-AS1Q8TAF5 88 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 PTERQ96BW5 349 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 GBP5Q96PP8 586 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 TMEM121Q9BTD3 319 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 NDC1Q9BTX1 674 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 AP1M1Q9BXS5 423 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 ILKAPQ9H0C8 392 aaPredicted RBP13.65□□□□□ -0.22
ERCC1-205ENST00000587888 P4HTMQ9NXG6 502 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 B3GNT3Q9Y2A9 372 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 KLHL20Q9Y2M5 609 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 PIKFYVEQ9Y2I7 2098 aa13.65□□□□□ -0.22
ERCC1-205ENST00000587888 SLC5A10A0PJK1 596 aa13.64□□□□□ -0.23
ERCC1-205ENST00000587888 CCDC162PA2VCL2 907 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms