RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 DRG1Q9Y295 367 aaKnown RBP10.9□□□□□ -0.66
ACTN4-209ENST00000586538 TLN1Q9Y490 2541 aaKnown RBP10.9□□□□□ -0.67
ACTN4-209ENST00000586538 PIKFYVEQ9Y2I7 2098 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 A0A0J9YY10 115 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 TCRBV7S2A1N4TA0A589 114 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 SLC5A10A0PJK1 596 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 CCDC162PA2VCL2 907 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 BTN3A3O00478 584 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 PRMT5O14744 637 aaPredicted RBP10.89□□□□□ -0.67
ACTN4-209ENST00000586538 PAMP19021 973 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 NPY2RP49146 381 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 RAB28P51157 221 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 BASP1P80723 227 aaKnown RBP10.89□□□□□ -0.67
ACTN4-209ENST00000586538 NFKB2Q00653 900 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 PRKG2Q13237 762 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 SLC5A12Q1EHB4 618 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 CCDC38Q502W7 563 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 RNF187Q5TA31 235 aaPredicted RBP10.89□□□□□ -0.67
ACTN4-209ENST00000586538 TLDC1Q6P9B6 456 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 UNC5DQ6UXZ4 953 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 ASB18Q6ZVZ8 466 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 ATCAYQ86WG3 371 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 DCUN1D3Q8IWE4 304 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 SYTL1Q8IYJ3 562 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 SLC22A15Q8IZD6 547 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 ADGRF3Q8IZF5 1079 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 TAB3Q8N5C8 712 aaPredicted RBP10.89□□□□□ -0.67
ACTN4-209ENST00000586538 TMEM102Q8N9M5 508 aaPredicted RBP10.89□□□□□ -0.67
ACTN4-209ENST00000586538 NAT14Q8WUY8 206 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 C1orf54Q8WWF1 131 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 DLG3Q92796 817 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 TRIM4Q9C037 500 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 CATSPERZQ9NTU4 200 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 PIH1D1Q9NWS0 290 aaKnown RBP10.89□□□□□ -0.67
ACTN4-209ENST00000586538 IRAK4Q9NWZ3 460 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 GPN3Q9UHW5 284 aaPredicted RBP10.89□□□□□ -0.67
ACTN4-209ENST00000586538 TP53TG5Q9Y2B4 290 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 VPS9D1Q9Y2B5 631 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 TDRKHQ9Y2W6 561 aaKnown RBP10.89□□□□□ -0.67
ACTN4-209ENST00000586538 PCDHGA9Q9Y5G4 932 aaKnown RBP10.89□□□□□ -0.67
ACTN4-209ENST00000586538 BOD1L1Q8NFC6 3051 aa10.89□□□□□ -0.67
ACTN4-209ENST00000586538 H3BMM5 538 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 OR2B3O76000 313 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 S1PR4O95977 384 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 CHRM5P08912 532 aaPredicted RBP10.88□□□□□ -0.67
ACTN4-209ENST00000586538 ST6GAL1P15907 406 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 UGT2B7P16662 529 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 VARSP26640 1264 aaKnown RBP10.88□□□□□ -0.67
ACTN4-209ENST00000586538 ACADLP28330 430 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 CCNFP41002 786 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 PGDP52209 483 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 HSPA14Q0VDF9 509 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 GPS2Q13227 327 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 SNX1Q13596 522 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 BRD3Q15059 726 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 ATP1A1-AS1Q5TC04 95 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 PTRHD1Q6GMV3 140 aaKnown RBP10.88□□□□□ -0.67
ACTN4-209ENST00000586538 MRNIPQ6NTE8 343 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 UNC5AQ6ZN44 842 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 MED25Q71SY5 747 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 SDCCAG8Q86SQ7 713 aaPredicted RBP10.88□□□□□ -0.67
ACTN4-209ENST00000586538 OTUD6BQ8N6M0 293 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 ENDOVQ8N8Q3 282 aaKnown RBP10.88□□□□□ -0.67
ACTN4-209ENST00000586538 OR5AR1Q8NGP9 310 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 NAP1L3Q99457 506 aaPredicted RBP10.88□□□□□ -0.67
ACTN4-209ENST00000586538 SLC25A23Q9BV35 468 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 AP1M1Q9BXS5 423 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 EPN3Q9H201 632 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 CHST8Q9H2A9 424 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 MRM3Q9HC36 420 aaKnown RBP10.88□□□□□ -0.67
ACTN4-209ENST00000586538 TXLNGQ9NUQ3 528 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 NDOR1Q9UHB4 597 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 TCFL5Q9UL49 500 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 SLC39A10Q9ULF5 831 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 ICKQ9UPZ9 632 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 BSNQ9UPA5 3926 aa10.88□□□□□ -0.67
ACTN4-209ENST00000586538 OR51F1A6NGY5 319 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 ISM1B1AKI9 464 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 ZSCAN9O15535 394 aaPredicted RBP10.87□□□□□ -0.67
ACTN4-209ENST00000586538 ZNF749O43361 778 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 NDUFS3O75489 264 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 FGGP02679 453 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 PRSS56P0CW18 603 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 PIM1P11309 404 aaPredicted RBP10.87□□□□□ -0.67
ACTN4-209ENST00000586538 TPSB2P20231 275 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 RPS3P23396 243 aaKnown RBP eCLIP10.87□□□□□ -0.678e-8■■■□□ 14.6
ACTN4-209ENST00000586538 RORAP35398 523 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 ARSFP54793 590 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 NCF4Q15080 339 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 TPSAB1Q15661 275 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 ZC3H12BQ5HYM0 836 aaKnown RBP10.87□□□□□ -0.67
ACTN4-209ENST00000586538 PLEKHS1Q5SXH7 462 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 RHBDD2Q6NTF9 364 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 FAM199XQ6PEV8 388 aaPredicted RBP10.87□□□□□ -0.67
ACTN4-209ENST00000586538 CDHR3Q6ZTQ4 885 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 OTOAQ7RTW8 1153 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 OR1L3Q8NH93 324 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 RAD51AP1Q96B01 352 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 NACC2Q96BF6 587 aa10.87□□□□□ -0.67
ACTN4-209ENST00000586538 VPS50Q96JG6 964 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms