RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 CREG1O75629 220 aa17.3■□□□□ 0.36
SRSF1-209ENST00000585096 VAPBO95292 243 aa17.3■□□□□ 0.36
SRSF1-209ENST00000585096 KRT14P02533 472 aa17.3■□□□□ 0.36
SRSF1-209ENST00000585096 CHRM5P08912 532 aaPredicted RBP17.3■□□□□ 0.36
SRSF1-209ENST00000585096 VPS41P49754 854 aa17.3■□□□□ 0.36
SRSF1-209ENST00000585096 ATP1A1-AS1Q5TC04 95 aa17.3■□□□□ 0.36
SRSF1-209ENST00000585096 MRNIPQ6NTE8 343 aa17.3■□□□□ 0.36
SRSF1-209ENST00000585096 PRICKLE2Q7Z3G6 844 aa17.3■□□□□ 0.36
SRSF1-209ENST00000585096 GSDMBQ8TAX9 411 aa17.3■□□□□ 0.36
SRSF1-209ENST00000585096 MR1Q95460 341 aa17.3■□□□□ 0.36
SRSF1-209ENST00000585096 CLIP3Q96DZ5 547 aa17.3■□□□□ 0.36
SRSF1-209ENST00000585096 TCTN2Q96GX1 697 aa17.3■□□□□ 0.36
SRSF1-209ENST00000585096 LRFN5Q96NI6 719 aa17.3■□□□□ 0.36
SRSF1-209ENST00000585096 TWSG1Q9GZX9 223 aa17.3■□□□□ 0.36
SRSF1-209ENST00000585096 GRPEL1Q9HAV7 217 aa17.3■□□□□ 0.36
SRSF1-209ENST00000585096 SYBUQ9NX95 663 aa17.3■□□□□ 0.36
SRSF1-209ENST00000585096 POLHQ9Y253 713 aa17.3■□□□□ 0.36
SRSF1-209ENST00000585096 TCRBV7S3A2A0A539 114 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 CDC14CA4D256 554 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 KPNA5O15131 536 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 PVRP15151 417 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 UGT2B7P16662 529 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 CYP2A7P20853 494 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 RPS3P23396 243 aaKnown RBP eCLIP17.29■□□□□ 0.362e-6■□□□□ 8.6
SRSF1-209ENST00000585096 AOAHP28039 575 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 MAGEA6P43360 314 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 TERF1P54274 439 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 TTC27Q6P3X3 843 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 FAM199XQ6PEV8 388 aaPredicted RBP17.29■□□□□ 0.36
SRSF1-209ENST00000585096 TTC23LQ6PF05 361 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 UNC5DQ6UXZ4 953 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 KRT222Q8N1A0 295 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 OR1L3Q8NH93 324 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 LKAAEAR1Q8TD35 194 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 N4BP2L2Q92802 583 aaPredicted RBP17.29■□□□□ 0.36
SRSF1-209ENST00000585096 MFSD3Q96ES6 412 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 MS4A14Q96JA4 679 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 OR2A14Q96R47 310 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 SLC7A5P2Q9GIP4 190 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 KLHL25Q9H0H3 589 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 P2RY12Q9H244 342 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 ACTL8Q9H568 366 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 SOX13Q9UN79 622 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 CDYLQ9Y232 598 aa17.29■□□□□ 0.36
SRSF1-209ENST00000585096 GCN1Q92616 2671 aaKnown RBP17.28■□□□□ 0.36
SRSF1-209ENST00000585096 ISM1B1AKI9 464 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 E7EQ34 232 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 MEN1O00255 615 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 PGRMC1O00264 195 aaKnown RBP17.28■□□□□ 0.36
SRSF1-209ENST00000585096 SLCO2B1O94956 709 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 TPBGLP0DKB5 382 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 PAMP19021 973 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 PTPN4P29074 926 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 RAB28P51157 221 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 ITGA1P56199 1179 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 ABRQ12979 859 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 GPS2Q13227 327 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 KCNJ11Q14654 390 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 KIR2DS3Q14952 304 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 RNF187Q5TA31 235 aaPredicted RBP17.28■□□□□ 0.36
SRSF1-209ENST00000585096 CASC4Q6P4E1 433 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 CES3Q6UWW8 571 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 CDHR3Q6ZTQ4 885 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 OTOAQ7RTW8 1153 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 VRK3Q8IV63 474 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 GPR135Q8IZ08 494 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 C19orf47Q8N9M1 422 aaKnown RBP17.28■□□□□ 0.36
SRSF1-209ENST00000585096 SLC38A9Q8NBW4 561 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 CFAP61Q8NHU2 1237 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 C9orf43Q8TAL5 461 aaPredicted RBP17.28■□□□□ 0.36
SRSF1-209ENST00000585096 TCF12Q99081 682 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 CHRNA10Q9GZZ6 450 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 ACTR5Q9H9F9 607 aaPredicted RBP17.28■□□□□ 0.36
SRSF1-209ENST00000585096 AKIRIN1Q9H9L7 192 aaPredicted RBP17.28■□□□□ 0.36
SRSF1-209ENST00000585096 SPHK1Q9NYA1 384 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 PLAGL1Q9UM63 463 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 FARSAQ9Y285 508 aaKnown RBP17.28■□□□□ 0.36
SRSF1-209ENST00000585096 MRFAP1Q9Y605 127 aa17.28■□□□□ 0.36
SRSF1-209ENST00000585096 A0A0J9YY10 115 aa17.27■□□□□ 0.36
SRSF1-209ENST00000585096 MAGEB16A2A368 324 aa17.27■□□□□ 0.36
SRSF1-209ENST00000585096 KIF5CO60282 957 aa17.27■□□□□ 0.36
SRSF1-209ENST00000585096 HBQ1P09105 142 aa17.27■□□□□ 0.36
SRSF1-209ENST00000585096 MLNP12872 115 aa17.27■□□□□ 0.36
SRSF1-209ENST00000585096 COILP38432 576 aaPredicted RBP17.27■□□□□ 0.36
SRSF1-209ENST00000585096 EIF3BP55884 814 aaKnown RBP17.27■□□□□ 0.36
SRSF1-209ENST00000585096 CYP1B1Q16678 543 aa17.27■□□□□ 0.36
SRSF1-209ENST00000585096 KYNUQ16719 465 aa17.27■□□□□ 0.36
SRSF1-209ENST00000585096 SLC5A12Q1EHB4 618 aa17.27■□□□□ 0.36
SRSF1-209ENST00000585096 ZNF789Q5FWF6 425 aa17.27■□□□□ 0.36
SRSF1-209ENST00000585096 PLEKHS1Q5SXH7 462 aa17.27■□□□□ 0.36
SRSF1-209ENST00000585096 PRAMEF17Q5VTA0 474 aa17.27■□□□□ 0.36
SRSF1-209ENST00000585096 IZUMO3Q5VZ72 239 aa17.27■□□□□ 0.36
SRSF1-209ENST00000585096 KIAA0930Q6ICG6 404 aaPredicted RBP17.27■□□□□ 0.36
SRSF1-209ENST00000585096 CCDC137Q6PK04 289 aaKnown RBP17.27■□□□□ 0.36
SRSF1-209ENST00000585096 ZNF517Q6ZMY9 492 aaPredicted RBP17.27■□□□□ 0.36
SRSF1-209ENST00000585096 ATG14Q6ZNE5 492 aa17.27■□□□□ 0.36
SRSF1-209ENST00000585096 SYVN1Q86TM6 617 aa17.27■□□□□ 0.36
SRSF1-209ENST00000585096 TRIM73Q86UV7 250 aa17.27■□□□□ 0.36
SRSF1-209ENST00000585096 DCUN1D3Q8IWE4 304 aa17.27■□□□□ 0.36
SRSF1-209ENST00000585096 REXO1L1PQ8IX06 675 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms