RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 NDUFS3O75489 264 aa20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 CHRM5P08912 532 aaPredicted RBP20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 FURINP09958 794 aa20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 UGT2B7P16662 529 aa20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 COILP38432 576 aaPredicted RBP20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 ABRQ12979 859 aa20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 ERV3-1Q14264 604 aa20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 CYP1B1Q16678 543 aa20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 CAND1Q86VP6 1230 aaKnown RBP20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 MPP5Q8N3R9 675 aa20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 OTUD6BQ8N6M0 293 aa20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 OR1L3Q8NH93 324 aa20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 CFAP61Q8NHU2 1237 aa20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 FANCEQ9HB96 536 aa20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 LATS2Q9NRM7 1088 aa20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 TRMT1Q9NXH9 659 aaKnown RBP20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 KCND3Q9UK17 655 aa20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 SOX13Q9UN79 622 aa20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 PCDHB3Q9Y5E6 796 aa20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 PCDHGA6Q9Y5G7 932 aa20.76■□□□□ 0.91
PPP4R1-228ENST00000584074 TMEM150CB9EJG8 249 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 PGRMC1O00264 195 aaKnown RBP20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 MAP3K7O43318 606 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 TMEM63AO94886 807 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 APOA4P06727 396 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 SARNPP82979 210 aaKnown RBP20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 NFKB2Q00653 900 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 GPS2Q13227 327 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 KCNAB2Q13303 367 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 DNAJC21Q5F1R6 531 aaKnown RBP20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 ZNF789Q5FWF6 425 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 CCDC137Q6PK04 289 aaKnown RBP20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 CDHR3Q6ZTQ4 885 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 FLVCR1-AS1Q8TAF5 88 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 CPT1BQ92523 772 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 OR2A14Q96R47 310 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 OSBPL9Q96SU4 736 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 NAP1L3Q99457 506 aaPredicted RBP20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 TRIM56Q9BRZ2 755 aaKnown RBP20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 ADNPQ9H2P0 1102 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 OR6C2Q9NZP2 312 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 CIDEBQ9UHD4 219 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 NEU2Q9Y3R4 380 aa20.75■□□□□ 0.91
PPP4R1-228ENST00000584074 PIKFYVEQ9Y2I7 2098 aa20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 C21orf140B9A014 251 aa20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 ZSCAN12O43309 604 aa20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 CREG1O75629 220 aa20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 SLCO2B1O94956 709 aa20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 MSL3P1P0C860 447 aa20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 EIF3BP55884 814 aaKnown RBP20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 MRNIPQ6NTE8 343 aa20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 HOOK3Q86VS8 718 aa20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 LMNTD1Q8N9Z9 388 aa20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 APOBEC4Q8WW27 367 aaKnown RBP20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 MR1Q95460 341 aa20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 SLC25A18Q9H1K4 315 aa20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 ACTL8Q9H568 366 aa20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 SYTL2Q9HCH5 934 aa20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 FAM60AQ9NP50 221 aa20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 GNPTGQ9UJJ9 305 aa20.74■□□□□ 0.91
PPP4R1-228ENST00000584074 TENM4Q6N022 2769 aa20.73■□□□□ 0.91
PPP4R1-228ENST00000584074 GOLGA8MH3BSY2 632 aa20.73■□□□□ 0.91
PPP4R1-228ENST00000584074 RPS3P23396 243 aaKnown RBP eCLIP20.73■□□□□ 0.91
PPP4R1-228ENST00000584074 PEBP1P30086 187 aaKnown RBP20.73■□□□□ 0.91
PPP4R1-228ENST00000584074 RPS18P62269 152 aaKnown RBP20.73■□□□□ 0.91
PPP4R1-228ENST00000584074 TMED2Q15363 201 aa20.73■□□□□ 0.91
PPP4R1-228ENST00000584074 ZIC1Q15915 447 aa20.73■□□□□ 0.91
PPP4R1-228ENST00000584074 CTSL3PQ5NE16 218 aa20.73■□□□□ 0.91
PPP4R1-228ENST00000584074 CASC4Q6P4E1 433 aa20.73■□□□□ 0.91
PPP4R1-228ENST00000584074 SDCCAG8Q86SQ7 713 aaPredicted RBP20.73■□□□□ 0.91
PPP4R1-228ENST00000584074 TMEM135Q86UB9 458 aa20.73■□□□□ 0.91
PPP4R1-228ENST00000584074 LRRC6Q86X45 466 aa20.73■□□□□ 0.91
PPP4R1-228ENST00000584074 ACTRT1Q8TDG2 376 aa20.73■□□□□ 0.91
PPP4R1-228ENST00000584074 FAM117AQ9C073 453 aa20.73■□□□□ 0.91
PPP4R1-228ENST00000584074 TWSG1Q9GZX9 223 aa20.73■□□□□ 0.91
PPP4R1-228ENST00000584074 COL6A6A6NMZ7 2263 aa20.73■□□□□ 0.91
PPP4R1-228ENST00000584074 CDC14CA4D256 554 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 ISM1B1AKI9 464 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 MEN1O00255 615 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 ZNF185O15231 689 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 SLC28A2O43868 658 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 KIF5CO60282 957 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 KDM1AO60341 852 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 PHF2O75151 1096 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 CYP2A7P20853 494 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 PKLRP30613 574 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 FMO4P31512 558 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 GRB7Q14451 532 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 KYNUQ16719 465 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 TYSND1Q2T9J0 566 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 PLEKHS1Q5SXH7 462 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 KIAA0930Q6ICG6 404 aaPredicted RBP20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 LCN10Q6JVE6 187 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 UNC5DQ6UXZ4 953 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 ZNF517Q6ZMY9 492 aaPredicted RBP20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 PRICKLE2Q7Z3G6 844 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 C2orf73Q8N5S3 287 aaPredicted RBP20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 C19orf47Q8N9M1 422 aaKnown RBP20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 LINC01555Q8NAE3 123 aa20.72■□□□□ 0.91
PPP4R1-228ENST00000584074 LPGAT1Q92604 370 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms