RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 KHDC1Q4VXA5 237 aaKnown RBP9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 DNAJC21Q5F1R6 531 aaKnown RBP9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 KCTD11Q693B1 232 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 KLHL35Q6PF15 583 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CYS1Q717R9 158 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 BPHLQ86WA6 291 aaPredicted RBP9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 APLFQ8IW19 511 aaPredicted RBP9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ARFGAP2Q8N6H7 521 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 EFCAB3Q8N7B9 438 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SLC41A2Q96JW4 573 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 FCRL4Q96PJ5 515 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PSMG3-AS1Q96PY0 264 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 VAT1Q99536 393 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ZCCHC2Q9C0B9 1178 aaKnown RBP9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ACTL8Q9H568 366 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ACSS3Q9H6R3 686 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 VPS37BQ9H9H4 285 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PPCSQ9HAB8 311 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 XAB2Q9HCS7 855 aaKnown RBP9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 BPIFA1Q9NP55 256 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SEMA5BQ9P283 1151 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SLC24A2Q9UI40 661 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 VPS4AQ9UN37 437 aa9.48□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PTPN13Q12923 2485 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 NAV2Q8IVL1 2488 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SDR42E2A6NKP2 422 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SMIM23A6NLE4 172 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TTLL8A6PVC2 850 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PMPCBO75439 489 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TIAF1O95411 115 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 MT-CYBP00156 380 aaPredicted RBP9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PSMB4P28070 264 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 MDH1P40925 334 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 RPS15P62841 145 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SARNPP82979 210 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PDE1BQ01064 536 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PLCL1Q15111 1095 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ATP13A5Q4VNC0 1218 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ZDHHC20Q5W0Z9 365 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 PWWP2BQ6NUJ5 590 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 ADGRD1Q6QNK2 874 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 C11orf96Q7Z7L8 435 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 AMZ2Q86W34 360 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 KMT5CQ86Y97 462 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 LURAP1LQ8IV03 231 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 RIBC1Q8N443 379 aaPredicted RBP9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SPATA22Q8NHS9 363 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 FBF1Q8TES7 1133 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 THAP4Q8WY91 577 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TADA1Q96BN2 335 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CD180Q99467 661 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 EBNA1BP2Q99848 306 aaKnown RBP9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CAPS2Q9BXY5 557 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GPR87Q9BY21 358 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 STMN4Q9H169 189 aaPredicted RBP9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GBA3Q9H227 469 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 GLOD4Q9HC38 313 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 KLHL8Q9P2G9 620 aaPredicted RBP9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 TMPRSS11EQ9UL52 423 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 CHMP2BQ9UQN3 213 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 WDR37Q9Y2I8 494 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 SPO11Q9Y5K1 396 aa9.47□□□□□ -0.89
CDK5RAP3-227ENST00000583352 IGHV5-51A0A0C4DH38 117 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 UBA6A0AVT1 1052 aaPredicted RBP9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 TLCD2A6NGC4 264 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 FOXO6A8MYZ6 492 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 AURKAO14965 403 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 PSMD3O43242 534 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 CPNE3O75131 537 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 CDH16O75309 829 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 POP7O75817 140 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 DNAJB5O75953 348 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 AGFG2O95081 481 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 AP2A1O95782 977 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 PDGFAP04085 211 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 EBLN1P0CF75 366 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 FOLR1P15328 257 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 CREB1P16220 341 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 PTPN4P29074 926 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 PHBP35232 272 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 HMGCLP35914 325 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 SPAM1P38567 509 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 LMAN1P49257 510 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 PGDP52209 483 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 PPP1CAP62136 330 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 GNGT1P63211 74 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 DMPKQ09013 629 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 MPP2Q14168 576 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 SPARCL1Q14515 664 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 KCNAB1Q14722 419 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 RPE65Q16518 533 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 UGT8Q16880 541 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 C4orf17Q53FE4 359 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 LDLRAP1Q5SW96 308 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 FHL5Q5TD97 284 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 STEAP4Q687X5 459 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 SYVN1Q86TM6 617 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 MPP5Q8N3R9 675 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 GALNT11Q8NCW6 608 aa9.46□□□□□ -0.9
CDK5RAP3-227ENST00000583352 GPR150Q8NGU9 434 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms