RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 RIPK2O43353 540 aa21■□□□□ 0.95
TSEN54-208ENST00000583173 THRAP10827 490 aa21■□□□□ 0.95
TSEN54-208ENST00000583173 SPRP35270 261 aaPredicted RBP21■□□□□ 0.95
TSEN54-208ENST00000583173 MAPK9P45984 424 aa21■□□□□ 0.95
TSEN54-208ENST00000583173 CSRP3P50461 194 aa21■□□□□ 0.95
TSEN54-208ENST00000583173 GFERP55789 205 aa21■□□□□ 0.95
TSEN54-208ENST00000583173 TRA2AQ13595 282 aaKnown RBP eCLIP21■□□□□ 0.95
TSEN54-208ENST00000583173 ERCC6LQ2NKX8 1250 aa21■□□□□ 0.95
TSEN54-208ENST00000583173 AMIGO1Q86WK6 493 aa21■□□□□ 0.95
TSEN54-208ENST00000583173 DCUN1D3Q8IWE4 304 aa21■□□□□ 0.95
TSEN54-208ENST00000583173 SLC44A1Q8WWI5 657 aa21■□□□□ 0.95
TSEN54-208ENST00000583173 LIN37Q96GY3 246 aaPredicted RBP21■□□□□ 0.95
TSEN54-208ENST00000583173 PRR11Q96HE9 360 aaPredicted RBP21■□□□□ 0.95
TSEN54-208ENST00000583173 TMEM121BQ9BXQ6 578 aaPredicted RBP21■□□□□ 0.95
TSEN54-208ENST00000583173 XKR8Q9H6D3 395 aa21■□□□□ 0.95
TSEN54-208ENST00000583173 SYNDIG1Q9H7V2 258 aa21■□□□□ 0.95
TSEN54-208ENST00000583173 HRASLS2Q9NWW9 162 aa21■□□□□ 0.95
TSEN54-208ENST00000583173 AKAP13Q12802 2813 aa20.99■□□□□ 0.95
TSEN54-208ENST00000583173 ARHGEF33A8MVX0 844 aa20.99■□□□□ 0.95
TSEN54-208ENST00000583173 RPN2P04844 631 aa20.99■□□□□ 0.95
TSEN54-208ENST00000583173 MPSTP25325 297 aa20.99■□□□□ 0.95
TSEN54-208ENST00000583173 CCNFP41002 786 aa20.99■□□□□ 0.95
TSEN54-208ENST00000583173 PPP1CAP62136 330 aa20.99■□□□□ 0.95
TSEN54-208ENST00000583173 PLCL1Q15111 1095 aa20.99■□□□□ 0.95
TSEN54-208ENST00000583173 ZKSCAN8Q15776 578 aaPredicted RBP20.99■□□□□ 0.95
TSEN54-208ENST00000583173 MAP9Q49MG5 647 aa20.99■□□□□ 0.95
TSEN54-208ENST00000583173 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.99■□□□□ 0.95
TSEN54-208ENST00000583173 KLHL35Q6PF15 583 aa20.99■□□□□ 0.95
TSEN54-208ENST00000583173 PIWIL4Q7Z3Z4 852 aaKnown RBP20.99■□□□□ 0.95
TSEN54-208ENST00000583173 UBXN4Q92575 508 aa20.99■□□□□ 0.95
TSEN54-208ENST00000583173 RAD51AP1Q96B01 352 aa20.99■□□□□ 0.95
TSEN54-208ENST00000583173 FOPNLQ96NB1 174 aa20.99■□□□□ 0.95
TSEN54-208ENST00000583173 SRMSQ9H3Y6 488 aa20.99■□□□□ 0.95
TSEN54-208ENST00000583173 POPDC3Q9HBV1 291 aa20.99■□□□□ 0.95
TSEN54-208ENST00000583173 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.99■□□□□ 0.95
TSEN54-208ENST00000583173 ANGPTL2Q9UKU9 493 aa20.99■□□□□ 0.95
TSEN54-208ENST00000583173 TDRKHQ9Y2W6 561 aaKnown RBP20.99■□□□□ 0.95
TSEN54-208ENST00000583173 V9GYY5 206 aaPredicted RBP20.99■□□□□ 0.95
TSEN54-208ENST00000583173 A0A087WUV0 522 aaPredicted RBP20.98■□□□□ 0.95
TSEN54-208ENST00000583173 BTN3A1O00481 513 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 ITGA2BP08514 1039 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 IL2P60568 153 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 FOXK2Q01167 660 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 PDAP1Q13442 181 aaKnown RBP20.98■□□□□ 0.95
TSEN54-208ENST00000583173 ZNF460Q14592 562 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 LRRC8EQ6NSJ5 796 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 LINC01555Q8NAE3 123 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 FLVCR1-AS1Q8TAF5 88 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 DENND1AQ8TEH3 1009 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 ANKRD49Q8WVL7 239 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 CCDC74BQ96LY2 380 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 DHRS4Q9BTZ2 278 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 NRSN2Q9GZP1 204 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 CAB39LQ9H9S4 337 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 OR6C2Q9NZP2 312 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 TXNDC16Q9P2K2 825 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 SLC39A10Q9ULF5 831 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 PLAGL1Q9UM63 463 aa20.98■□□□□ 0.95
TSEN54-208ENST00000583173 TRABD2BA6NFA1 517 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 MYO1CO00159 1063 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 RASGRF2O14827 1237 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 TOX3O15405 576 aaPredicted RBP20.97■□□□□ 0.95
TSEN54-208ENST00000583173 KIF1CO43896 1103 aaKnown RBP20.97■□□□□ 0.95
TSEN54-208ENST00000583173 PRICKLE3O43900 615 aaPredicted RBP20.97■□□□□ 0.95
TSEN54-208ENST00000583173 CAPNS1P04632 268 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 ANKRD34CP0C6C1 535 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 ERGP11308 486 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 ZNF37AP17032 561 aaPredicted RBP20.97■□□□□ 0.95
TSEN54-208ENST00000583173 POLR2CP19387 275 aaPredicted RBP20.97■□□□□ 0.95
TSEN54-208ENST00000583173 GCAP28676 217 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 PKLRP30613 574 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 SHMT2P34897 504 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 BDKRB1P46663 353 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 RGS4P49798 205 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 SLC29A2Q14542 456 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 USP10Q14694 798 aaKnown RBP20.97■□□□□ 0.95
TSEN54-208ENST00000583173 C16orf72Q14CZ0 275 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 RTP5Q14D33 572 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 OOSP2Q86WS3 158 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 UHMK1Q8TAS1 419 aaKnown RBP20.97■□□□□ 0.95
TSEN54-208ENST00000583173 HMGCLL1Q8TB92 370 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 SKA2Q8WVK7 121 aaPredicted RBP20.97■□□□□ 0.95
TSEN54-208ENST00000583173 KLHL6Q8WZ60 621 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 ANKRD7Q92527 254 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 GATA6Q92908 595 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 LINGO1Q96FE5 620 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 ZDHHC12Q96GR4 267 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 SLC12A9Q9BXP2 914 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 PARD6BQ9BYG5 372 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 TSR3Q9UJK0 312 aaKnown RBP20.97■□□□□ 0.95
TSEN54-208ENST00000583173 ADAMTS6Q9UKP5 1117 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 IKZF3Q9UKT9 509 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 RAB21Q9UL25 225 aa20.97■□□□□ 0.95
TSEN54-208ENST00000583173 KRT87PA6NCN2 255 aa20.96■□□□□ 0.95
TSEN54-208ENST00000583173 HGSO14964 777 aaPredicted RBP20.96■□□□□ 0.95
TSEN54-208ENST00000583173 SLC16A5O15375 505 aa20.96■□□□□ 0.95
TSEN54-208ENST00000583173 SAT1P21673 171 aa20.96■□□□□ 0.95
TSEN54-208ENST00000583173 LSSP48449 732 aa20.96■□□□□ 0.95
TSEN54-208ENST00000583173 RAB28P51157 221 aa20.96■□□□□ 0.95
TSEN54-208ENST00000583173 KPNA2P52292 529 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms