RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 TRIM49P0CI25 452 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 TRIM49CP0CI26 452 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 CA6P23280 308 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 SLC8A3P57103 927 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 UGP2Q16851 508 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 FASTKD1Q53R41 847 aaKnown RBP3.46□□□□□ -1.86
COPS3-217ENST00000583160 BSPRYQ5W0U4 402 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 ADGRF2Q8IZF7 708 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 MARVELD2Q8N4S9 558 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 ZFAND2BQ8WV99 257 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 RTN4RQ9BZR6 473 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 EIF2B3Q9NR50 452 aaKnown RBP3.46□□□□□ -1.86
COPS3-217ENST00000583160 OSER1Q9NX31 292 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 RAD54L2Q9Y4B4 1467 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 CROCCQ5TZA2 2017 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 PBRM1Q86U86 1689 aa3.46□□□□□ -1.86
COPS3-217ENST00000583160 NUP160Q12769 1436 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 SHROOM2Q13796 1616 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 BIVM-ERCC5R4GMW8 1640 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 HYKKA2RU49 373 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 HEPACAM2A8MVW5 462 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.45□□□□□ -1.86
COPS3-217ENST00000583160 CLDN1O95832 211 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 SHC1P29353 583 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 GARSP41250 739 aaKnown RBP3.45□□□□□ -1.86
COPS3-217ENST00000583160 TMF1P82094 1093 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 AIMP2Q13155 320 aaKnown RBP3.45□□□□□ -1.86
COPS3-217ENST00000583160 KLHL26Q53HC5 615 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 CCDC70Q6NSX1 233 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 IL27RAQ6UWB1 636 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 SH2D6Q7Z4S9 175 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 COMMD2Q86X83 199 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 LACC1Q8IV20 430 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 TTC39CQ8N584 583 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 TRIML1Q8N9V2 468 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 OR5M8Q8NGP6 311 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 OR13J1Q8NGT2 312 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 ZNF300Q96RE9 604 aaPredicted RBP3.45□□□□□ -1.86
COPS3-217ENST00000583160 FNBP1Q96RU3 617 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 PITPNM3Q9BZ71 974 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 S1PR5Q9H228 398 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 SMARCAD1Q9H4L7 1026 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 ATP13A3Q9H7F0 1226 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 ZNF701Q9NV72 531 aaPredicted RBP3.45□□□□□ -1.86
COPS3-217ENST00000583160 ERAP1Q9NZ08 941 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 HACL1Q9UJ83 578 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 MTUS1Q9ULD2 1270 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 WDR37Q9Y2I8 494 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 ZHX2Q9Y6X8 837 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 GAPVD1Q14C86 1478 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 SNAPC4Q5SXM2 1469 aa3.45□□□□□ -1.86
COPS3-217ENST00000583160 ERICH3Q5RHP9 1530 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 ABCA7Q8IZY2 2146 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 LNP1A1A4G5 178 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 F5H0A9 414 aaPredicted RBP3.44□□□□□ -1.86
COPS3-217ENST00000583160 EPB41L2O43491 1005 aaKnown RBP3.44□□□□□ -1.86
COPS3-217ENST00000583160 XRCC3O43542 346 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 GATA2P23769 480 aaPredicted RBP3.44□□□□□ -1.86
COPS3-217ENST00000583160 SLC6A6P31641 620 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 HADHAP40939 763 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 HNF4AP41235 474 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 PDX1P52945 283 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 MFAP4P55083 255 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 GSDMDP57764 484 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 HERV-K104P61576 105 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 DRP2Q13474 957 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 NECTIN1Q15223 517 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 HLA-BQ31612 363 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 FAAH2Q6GMR7 532 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 FIGLAQ6QHK4 219 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 PTAR1Q7Z6K3 402 aaPredicted RBP3.44□□□□□ -1.86
COPS3-217ENST00000583160 LDB1Q86U70 411 aaPredicted RBP3.44□□□□□ -1.86
COPS3-217ENST00000583160 LRRTM1Q86UE6 522 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 AACSQ86V21 672 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 HOGA1Q86XE5 327 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 NIPA2Q8N8Q9 360 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 AMER3Q8N944 861 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 OR5AP2Q8NGF4 316 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 OR2AJ1Q8NGZ0 328 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 MOSPD2Q8NHP6 518 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 IRGQQ8WZA9 623 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 ARHGAP45Q92619 1136 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 HDAC2Q92769 488 aaKnown RBP3.44□□□□□ -1.86
COPS3-217ENST00000583160 BTBD10Q9BSF8 475 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 FNDC11Q9BVV2 318 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 DPAGT1Q9H3H5 408 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 KCNK15Q9H427 330 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 ZHX1Q9UKY1 873 aaPredicted RBP3.44□□□□□ -1.86
COPS3-217ENST00000583160 TOP2BQ02880 1626 aa3.44□□□□□ -1.86
COPS3-217ENST00000583160 MYH14Q7Z406 1995 aaKnown RBP3.43□□□□□ -1.86
COPS3-217ENST00000583160 PTGES3LE9PB15 166 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 PI15O43692 258 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 CREG1O75629 220 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 DFFBO76075 338 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 NXPH2O95156 264 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 ACADSP16219 412 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 GABRA5P31644 462 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 CXCL9Q07325 125 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 GRAPQ13588 217 aa3.43□□□□□ -1.86
COPS3-217ENST00000583160 IRF3Q14653 427 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms