RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 CCDC3Q9BQI4 270 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 MVB12BQ9H7P6 319 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 SLC40A1Q9NP59 571 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 GRID1Q9ULK0 1009 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 ACOT9Q9Y305 439 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 DHRS7Q9Y394 339 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 CFAP20Q9Y6A4 193 aaKnown RBP15.13■□□□□ 0.01
SS18-216ENST00000580751 ASXL3Q9C0F0 2248 aa15.13■□□□□ 0.01
SS18-216ENST00000580751 DCHS1Q96JQ0 3298 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 A0A096LPK6 155 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 LILRA5A6NI73 299 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 COPEO14579 308 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 GLRA3O75311 464 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 C2P06681 752 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 CBSLP0DN79 551 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 PYGBP11216 843 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 ACADLP28330 430 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 CBSP35520 551 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 EPHA4P54764 986 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 CDKN2DP55273 166 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 TAS2R39P59534 338 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 PDAP1Q13442 181 aaKnown RBP15.12■□□□□ 0.01
SS18-216ENST00000580751 TSNAXIP1Q2TAA8 658 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 CCDC157Q569K6 752 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 UNC5DQ6UXZ4 953 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 TMEM26Q6ZUK4 368 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 SPRED1Q7Z699 444 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 VRK3Q8IV63 474 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 GIMAP7Q8NHV1 300 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 SKA2Q8WVK7 121 aaPredicted RBP15.12■□□□□ 0.01
SS18-216ENST00000580751 TFGQ92734 400 aaPredicted RBP15.12■□□□□ 0.01
SS18-216ENST00000580751 TSNARE1Q96NA8 513 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 FOPNLQ96NB1 174 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 IQCGQ9H095 443 aaKnown RBP15.12■□□□□ 0.01
SS18-216ENST00000580751 ABCG4Q9H172 646 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 EPB41L1Q9H4G0 881 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 GALPQ9UBC7 116 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 ASF1AQ9Y294 204 aa15.12■□□□□ 0.01
SS18-216ENST00000580751 RP1P56715 2156 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 MAPK9P45984 424 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 RGS4P49798 205 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 GPLD1P80108 840 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 GPR18Q14330 331 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 DUS1LQ6P1R4 473 aaKnown RBP15.11■□□□□ 0.01
SS18-216ENST00000580751 NEK10Q6ZWH5 1172 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 RAPH1Q70E73 1250 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 DGLUCYQ7Z3D6 616 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 CLEC14AQ86T13 490 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 TBC1D1Q86TI0 1168 aaPredicted RBP15.11■□□□□ 0.01
SS18-216ENST00000580751 SLCO6A1Q86UG4 719 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 PIM3Q86V86 326 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 TBC1D21Q8IYX1 336 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 PDLIM5Q96HC4 596 aaKnown RBP15.11■□□□□ 0.01
SS18-216ENST00000580751 FERD3LQ96RJ6 166 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 SLC30A3Q99726 388 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 TRIT1Q9H3H1 467 aaKnown RBP15.11■□□□□ 0.01
SS18-216ENST00000580751 KIR3DX1Q9H7L2 352 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 KCNK4Q9NYG8 393 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 NKIRAS1Q9NYS0 192 aa15.11■□□□□ 0.01
SS18-216ENST00000580751 TMEM120BA0PK00 339 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 KDM1AO60341 852 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 WISP3O95389 354 aaPredicted RBP15.1■□□□□ 0.01
SS18-216ENST00000580751 RPLP0P05388 317 aaKnown RBP15.1■□□□□ 0.01
SS18-216ENST00000580751 SLC35E2BP0CK96 405 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 SAT1P21673 171 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 ALDH4A1P30038 563 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 TIAL1Q01085 375 aaKnown RBP eCLIP15.1■□□□□ 0.01
SS18-216ENST00000580751 PLCL1Q15111 1095 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 CLPPQ16740 277 aaPredicted RBP15.1■□□□□ 0.01
SS18-216ENST00000580751 FAM83EQ2M2I3 478 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 CCDC153Q494R4 210 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 ACSBG2Q5FVE4 666 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 CPNE9Q8IYJ1 553 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 C4orf33Q8N1A6 199 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 NKAPQ8N5F7 415 aaKnown RBP15.1■□□□□ 0.01
SS18-216ENST00000580751 Q8N9G6 341 aaPredicted RBP15.1■□□□□ 0.01
SS18-216ENST00000580751 ACVR1CQ8NER5 493 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 OR10G6Q8NH81 332 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 OR5K2Q8NHB8 316 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 UBXN10Q96LJ8 280 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 OLFM1Q99784 485 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 SYNDIG1Q9H7V2 258 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 GPAMQ9HCL2 828 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 KCNK9Q9NPC2 374 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 POLG2Q9UHN1 485 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 MID2Q9UJV3 735 aa15.1■□□□□ 0.01
SS18-216ENST00000580751 IGHV1OR21-1A0A087WYE8 117 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 DUX1O43812 170 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 KLHL2O95198 593 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 MATN4O95460 622 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 MPC1LP0DKB6 136 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 HPDP32754 393 aaPredicted RBP15.09■□□□□ 0.01
SS18-216ENST00000580751 PPM1FP49593 454 aaPredicted RBP15.09■□□□□ 0.01
SS18-216ENST00000580751 OR1D5P58170 312 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 IL2P60568 153 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 ATP6V0D1P61421 351 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 ABRQ12979 859 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 SPIDRQ14159 915 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 KLC3Q6P597 504 aa15.09■□□□□ 0.01
SS18-216ENST00000580751 TTC23LQ6PF05 361 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms