RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 BPHLQ86WA6 291 aaPredicted RBP6.36□□□□□ -1.39
TRAF4-213ENST00000578917 TMEM126BQ8IUX1 230 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 PALM2Q8IXS6 379 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 LMNTD2Q8IXW0 634 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 GPR135Q8IZ08 494 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 SLC22A15Q8IZD6 547 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 UNC5BQ8IZJ1 945 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 NLGN4XQ8N0W4 816 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 ZBTB2Q8N680 514 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 ESX1Q8N693 406 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 SPATA4Q8NEY3 305 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 NLGN4YQ8NFZ3 816 aaPredicted RBP6.36□□□□□ -1.39
TRAF4-213ENST00000578917 OR5K2Q8NHB8 316 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 MAGEC3Q8TD91 643 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 KLHL6Q8WZ60 621 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 LPGAT1Q92604 370 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 SLCO2A1Q92959 643 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 RAD51AP1Q96B01 352 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 SLC22A18Q96BI1 424 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 SIGLEC10Q96LC7 697 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 C16orf45Q96MC5 204 aaPredicted RBP6.36□□□□□ -1.39
TRAF4-213ENST00000578917 EBNA1BP2Q99848 306 aaKnown RBP6.36□□□□□ -1.39
TRAF4-213ENST00000578917 ARHGAP9Q9BRR9 750 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 TRIM51Q9BSJ1 452 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 KLHL25Q9H0H3 589 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 P2RY12Q9H244 342 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 APMAPQ9HDC9 416 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 FBXO6Q9NRD1 293 aaPredicted RBP6.36□□□□□ -1.39
TRAF4-213ENST00000578917 LATS2Q9NRM7 1088 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 FAM114A2Q9NRY5 505 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 C1GALT1Q9NS00 363 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 KCND1Q9NSA2 647 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 INTS10Q9NVR2 710 aaKnown RBP6.36□□□□□ -1.39
TRAF4-213ENST00000578917 OR6C2Q9NZP2 312 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 FBXO5Q9UKT4 447 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 ACSL6Q9UKU0 697 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 PADI1Q9ULC6 663 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 PLAGL1Q9UM63 463 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 SNX24Q9Y343 169 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 UTP11Q9Y3A2 253 aaKnown RBP6.36□□□□□ -1.39
TRAF4-213ENST00000578917 ATRXP46100 2492 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 MGAQ8IWI9 3026 aa6.36□□□□□ -1.39
TRAF4-213ENST00000578917 ARHGEF17Q96PE2 2063 aaPredicted RBP6.35□□□□□ -1.39
TRAF4-213ENST00000578917 PLXNB3Q9ULL4 1909 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 ZCWPW2A0A1B0GU75 182 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 TEX51A0A1B0GUA7 166 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 EFSO43281 561 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 NIPSNAP2O75323 286 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 VPS26AO75436 327 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 GPC4O75487 556 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 BANF1O75531 89 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 SPAG6O75602 509 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 SCRG1O75711 98 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 KIAA0754O94854 1291 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 HAUS5O94927 633 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 SYF2O95926 243 aaKnown RBP6.35□□□□□ -1.39
TRAF4-213ENST00000578917 S1PR4O95977 384 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 NTRK1P04629 796 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 KLK3P07288 261 aaPredicted RBP6.35□□□□□ -1.39
TRAF4-213ENST00000578917 CHRM5P08912 532 aaPredicted RBP6.35□□□□□ -1.39
TRAF4-213ENST00000578917 CYP2A7P20853 494 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 ARNTP27540 789 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 CCNFP41002 786 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 ELK3P41970 407 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 SKIV2L2P42285 1042 aaKnown RBP6.35□□□□□ -1.39
TRAF4-213ENST00000578917 CARSP49589 748 aaKnown RBP6.35□□□□□ -1.39
TRAF4-213ENST00000578917 RAB28P51157 221 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 KPNA2P52292 529 aaKnown RBP6.35□□□□□ -1.39
TRAF4-213ENST00000578917 ADARP55265 1226 aaKnown RBP6.35□□□□□ -1.39
TRAF4-213ENST00000578917 TUBB4BP68371 445 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 CKAP4Q07065 602 aaKnown RBP6.35□□□□□ -1.39
TRAF4-213ENST00000578917 PDIA2Q13087 525 aaKnown RBP6.35□□□□□ -1.39
TRAF4-213ENST00000578917 TUBB2AQ13885 445 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 CRYMQ14894 314 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 KIR2DS3Q14952 304 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 TYSND1Q2T9J0 566 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.35□□□□□ -1.39
TRAF4-213ENST00000578917 ZNF658BQ4V348 819 aaPredicted RBP6.35□□□□□ -1.39
TRAF4-213ENST00000578917 SPANXN3Q5MJ09 141 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 UGT3A1Q6NUS8 523 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 SPESP1Q6UW49 350 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 UNC5DQ6UXZ4 953 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 CENPUQ71F23 418 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 TAX1BP1Q86VP1 789 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 ANKMY2Q8IV38 441 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 VRK3Q8IV63 474 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 DCUN1D3Q8IWE4 304 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 DENND6AQ8IWF6 608 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 ADGRF3Q8IZF5 1079 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 CARFQ8N187 725 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 BMPERQ8N8U9 685 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 GALNT6Q8NCL4 622 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 OR8K5Q8NH50 307 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 LKAAEAR1Q8TD35 194 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 INPP5DQ92835 1189 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 NKD1Q969G9 470 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 PMEPA1Q969W9 287 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 LRRC39Q96DD0 335 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 CLIP3Q96DZ5 547 aa6.35□□□□□ -1.39
TRAF4-213ENST00000578917 TCTN2Q96GX1 697 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms