RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 PRPF4O43172 522 aaKnown RBP eCLIP10.87□□□□□ -0.673e-8■□□□□ 10.6
CDK5RAP3-204ENST00000577664 PCDHGA12O60330 932 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 PSIP1O75475 530 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 LTA4HP09960 611 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 CCDC166P0CW27 439 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 GIMD1P0DJR0 217 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 PYGBP11216 843 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 ACP5P13686 325 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 BRAFP15056 766 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 CD1DP15813 335 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 XRCC1P18887 633 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 KRT4P19013 534 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 PDHA2P29803 388 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 ARRB1P49407 418 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 RIPPLY3P57055 190 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 HSPA14Q0VDF9 509 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 ILF3Q12906 894 aaKnown RBP eCLIP10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 DLG1Q12959 904 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 GRIK2Q13002 908 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 FAM83EQ2M2I3 478 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 TSNAXIP1Q2TAA8 658 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 HLA-BQ31612 363 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 CDKL4Q5MAI5 379 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 IYDQ6PHW0 289 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 CRTC3Q6UUV7 619 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 LAYNQ6UX15 382 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 PIM3Q86V86 326 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 MARCH9Q86YJ5 346 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 VRK3Q8IV63 474 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 KIAA1191Q96A73 305 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 ARL8AQ96BM9 186 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 ATP6V1G3Q96LB4 118 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 LRRC61Q9BV99 259 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 TWSG1Q9GZX9 223 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 TCEAL2Q9H3H9 227 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 TFB2MQ9H5Q4 396 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 RDH14Q9HBH5 336 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 NMRAL1Q9HBL8 299 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 MED4Q9NPJ6 270 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 DNAJC28Q9NX36 388 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 APOBEC3BQ9UH17 382 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 GRID1Q9ULK0 1009 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 PLEKHM1Q9Y4G2 1056 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 PCDHGB2Q9Y5G2 931 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 KNL1Q8NG31 2342 aa10.87□□□□□ -0.67
CDK5RAP3-204ENST00000577664 NEMP2A6NFY4 417 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 SMIM23A6NLE4 172 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 PHGDHO43175 533 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 AQP9O43315 295 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 C8GP07360 202 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 ENO2P09104 434 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 F3P13726 295 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 CTSEP14091 401 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 PGGT1BP53609 377 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 TLE3Q04726 772 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 SP140Q13342 867 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 ZNF460Q14592 562 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 PRRT3Q5FWE3 981 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 UNC5DQ6UXZ4 953 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 RAPH1Q70E73 1250 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 RD3Q7Z3Z2 195 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 TBC1D1Q86TI0 1168 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 GKN2Q86XP6 184 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 CPNE9Q8IYJ1 553 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 PLD6Q8N2A8 252 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 SLC25A45Q8N413 288 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 LILRA3Q8N6C8 439 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 ZNF548Q8NEK5 533 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 CCL4L1Q8NHW4 92 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 SAP25Q8TEE9 199 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 NXPE2Q96DL1 559 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 SLC12A9Q9BXP2 914 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 FAM53CQ9NYF3 392 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 TAAR2Q9P1P5 351 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 TBC1D29Q9UFV1 150 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 MOSPD1Q9UJG1 213 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 FBN2P35556 2912 aa10.86□□□□□ -0.67
CDK5RAP3-204ENST00000577664 KIR2DS5A0A0G2JLQ3 304 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 A0A0G2JNG1 304 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 KIR2DS3K7RE56 304 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 YY2O15391 372 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 GLRA3O75311 464 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 CER1O95813 267 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 RBP1P09455 135 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 SLC2A4P14672 509 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 ITGB6P18564 788 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 SAT1P21673 171 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 AK4P27144 223 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 EPHA8P29322 1005 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 CDKL1Q00532 357 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 BOP1Q14137 746 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 KIR2DS5Q14953 304 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 CLCA4Q14CN2 919 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 PPP1R3AQ16821 1122 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 CCDC153Q494R4 210 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 TTMPQ5BVD1 217 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 ZNF542PQ5EBM4 170 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 SBSNQ6UWP8 590 aa10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 SRRM1Q8IYB3 904 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP3-204ENST00000577664 TBC1D21Q8IYX1 336 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms