RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 PLEKHS1Q5SXH7 462 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 FBXO38Q6PIJ6 1188 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 CNSTQ6PJW8 725 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 UNC5DQ6UXZ4 953 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 VRK3Q8IV63 474 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 CFAP36Q96G28 342 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 SLC41A2Q96JW4 573 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 SIGLEC10Q96LC7 697 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 GPN2Q9H9Y4 310 aaPredicted RBP14.8□□□□□ -0.04
SMG6-220ENST00000576218 C1GALT1Q9NS00 363 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 FGF21Q9NSA1 209 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 IARS2Q9NSE4 1012 aaKnown RBP14.8□□□□□ -0.04
SMG6-220ENST00000576218 ACTR10Q9NZ32 417 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 ICKQ9UPZ9 632 aa14.8□□□□□ -0.04
SMG6-220ENST00000576218 ZCWPW2A0A1B0GU75 182 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 SLC9B1P1A6NJY1 282 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 GPC4O75487 556 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 BANF1O75531 89 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 CCNYL3P0C7X3 344 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 FOLR1P15328 257 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 PRDX3P30048 256 aaKnown RBP14.79□□□□□ -0.04
SMG6-220ENST00000576218 C2orf54Q08AI8 447 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 CALCOCO2Q13137 446 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 HSP90AA5PQ58FG0 334 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 SPANXN3Q5MJ09 141 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 HP1BP3Q5SSJ5 553 aaPredicted RBP14.79□□□□□ -0.04
SMG6-220ENST00000576218 UNC5AQ6ZN44 842 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 DTX1Q86Y01 620 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 TMEM126BQ8IUX1 230 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 DENND6AQ8IWF6 608 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 ZBTB2Q8N680 514 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 ESX1Q8N693 406 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 BBOF1Q8ND07 529 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 CHD6Q8TD26 2715 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 MAGEC3Q8TD91 643 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 NKD1Q969G9 470 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 C16orf45Q96MC5 204 aaPredicted RBP14.79□□□□□ -0.04
SMG6-220ENST00000576218 UBL7Q96S82 380 aaPredicted RBP14.79□□□□□ -0.04
SMG6-220ENST00000576218 EBNA1BP2Q99848 306 aaKnown RBP14.79□□□□□ -0.04
SMG6-220ENST00000576218 EFHD1Q9BUP0 239 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 RAB11FIP5Q9BXF6 653 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 SLC7A5P2Q9GIP4 190 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 KLHL25Q9H0H3 589 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 KCND1Q9NSA2 647 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 IRAK4Q9NWZ3 460 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 OR6C2Q9NZP2 312 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 ZC3H7BQ9UGR2 993 aaKnown RBP14.79□□□□□ -0.04
SMG6-220ENST00000576218 CIDEBQ9UHD4 219 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 CHMP2BQ9UQN3 213 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 FAM169AQ9Y6X4 670 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 ITPR1Q14643 2758 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 ZFYVE26Q68DK2 2539 aa14.79□□□□□ -0.04
SMG6-220ENST00000576218 PTPRQQ9UMZ3 2332 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 K7ENP7 123 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 EFSO43281 561 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 SLCO2B1O94956 709 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 F7P08709 466 aaPredicted RBP14.78□□□□□ -0.04
SMG6-220ENST00000576218 CHRM5P08912 532 aaPredicted RBP14.78□□□□□ -0.04
SMG6-220ENST00000576218 CCNFP41002 786 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 BDKRB1P46663 353 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 RAB28P51157 221 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 ADARP55265 1226 aaKnown RBP14.78□□□□□ -0.04
SMG6-220ENST00000576218 TUBB4BP68371 445 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 RHDQ02161 417 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 CKAP4Q07065 602 aaKnown RBP14.78□□□□□ -0.04
SMG6-220ENST00000576218 SRSF6Q13247 344 aaKnown RBP14.78□□□□□ -0.04
SMG6-220ENST00000576218 TUBB2AQ13885 445 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 GPR19Q15760 415 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.78□□□□□ -0.04
SMG6-220ENST00000576218 INO80CQ6PI98 192 aaPredicted RBP14.78□□□□□ -0.04
SMG6-220ENST00000576218 SPESP1Q6UW49 350 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 C6orf15Q6UXA7 325 aaPredicted RBP14.78□□□□□ -0.04
SMG6-220ENST00000576218 CENPUQ71F23 418 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 MAATS1Q7Z4T9 603 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 TAX1BP1Q86VP1 789 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 BPHLQ86WA6 291 aaPredicted RBP14.78□□□□□ -0.04
SMG6-220ENST00000576218 ADGRF3Q8IZF5 1079 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 D2HGDHQ8N465 521 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 GALNT6Q8NCL4 622 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 PPM1MQ96MI6 270 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 BIRC8Q96P09 236 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 NRTNQ99748 197 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 TUBB2BQ9BVA1 445 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 PILRAQ9UKJ1 303 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 FBXO5Q9UKT4 447 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 CDYLQ9Y232 598 aa14.78□□□□□ -0.04
SMG6-220ENST00000576218 CFAP47Q6ZTR5 3102 aa14.77□□□□□ -0.04
SMG6-220ENST00000576218 SDK2Q58EX2 2172 aa14.77□□□□□ -0.04
SMG6-220ENST00000576218 FAM187AA6NFU0 413 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 TMEM150CB9EJG8 249 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 VPS26AO75436 327 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 SPAG6O75602 509 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 SEC31AO94979 1220 aaKnown RBP14.77□□□□□ -0.05
SMG6-220ENST00000576218 S1PR4O95977 384 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 MT-ND3P03897 115 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 ERVK-10P10266 1014 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 FGF5P12034 268 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 LIFP15018 202 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 ST6GAL1P15907 406 aa14.77□□□□□ -0.05
SMG6-220ENST00000576218 UGT2B7P16662 529 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms