RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 HIPK1Q86Z02 1210 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 ITCHQ96J02 903 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 GPR63Q9BZJ6 419 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 CLPBQ9H078 707 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 LRTM1Q9HBL6 345 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 TRMT13Q9NUP7 481 aaKnown RBP15.32■□□□□ 0.04
NUP88-207ENST00000573584 IL17CQ9P0M4 197 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 OPTCQ9UBM4 332 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 PCDHB14Q9Y5E9 798 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 CPQQ9Y646 472 aa15.32■□□□□ 0.04
NUP88-207ENST00000573584 TOR1BO14657 336 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 PRAMEF12O95522 483 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 FTH1P02794 183 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 CCDC159P0C7I6 412 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 NRIP1P48552 1158 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 SGSHP51688 502 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 RFX4Q33E94 735 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 SUSD1Q6UWL2 747 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 RGL4Q8IZJ4 473 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 CARNMT1Q8N4J0 409 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 OR7A2PQ8NGA2 310 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 TAMM41Q96BW9 452 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 EID2BQ96D98 161 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 FAM120BQ96EK7 910 aaKnown RBP15.31■□□□□ 0.04
NUP88-207ENST00000573584 SPATA17Q96L03 361 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 FAM126AQ9BYI3 521 aaPredicted RBP15.31■□□□□ 0.04
NUP88-207ENST00000573584 MAGIXQ9H6Y5 334 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 WWOXQ9NZC7 414 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 MTRRQ9UBK8 725 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 AP3M1Q9Y2T2 418 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 PCDHB9Q9Y5E1 797 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 AXIN1O15169 862 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 UGT2B4P06133 528 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 RGS4P49798 205 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 RAPSNQ13702 412 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 MRPL58Q14197 206 aaKnown RBP15.31■□□□□ 0.04
NUP88-207ENST00000573584 ATG9BQ674R7 924 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 SLC24A5Q71RS6 500 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 GALNT13Q8IUC8 556 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 FAR1Q8WVX9 515 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 ALPK1Q96QP1 1244 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 GPR62Q9BZJ7 368 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 CD244Q9BZW8 370 aa15.31■□□□□ 0.04
NUP88-207ENST00000573584 TRIT1Q9H3H1 467 aaKnown RBP15.31■□□□□ 0.04
NUP88-207ENST00000573584 H0Y626 953 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 MITFO75030 526 aaPredicted RBP15.3■□□□□ 0.04
NUP88-207ENST00000573584 RECQL5O94762 991 aaPredicted RBP15.3■□□□□ 0.04
NUP88-207ENST00000573584 CELF2O95319 508 aaKnown RBP15.3■□□□□ 0.04
NUP88-207ENST00000573584 TRIM16O95361 564 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 ANGPTL1O95841 491 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 FSHRP23945 695 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 IL18R1Q13478 541 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 OXA1LQ15070 435 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 PHKG1Q16816 387 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 SMU1Q2TAY7 513 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 PERM1Q5SV97 790 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 RNF219Q5W0B1 726 aaPredicted RBP15.3■□□□□ 0.04
NUP88-207ENST00000573584 RSPO2Q6UXX9 243 aaPredicted RBP15.3■□□□□ 0.04
NUP88-207ENST00000573584 C16orf59Q7L2K0 433 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 TRIM46Q7Z4K8 759 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 GALNT5Q7Z7M9 940 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 C10orf111Q8N326 155 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 MCOLN3Q8TDD5 553 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 RORBQ92753 470 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 PYURFQ96I23 114 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 BOCQ9BWV1 1114 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 WDR12Q9GZL7 423 aaKnown RBP15.3■□□□□ 0.04
NUP88-207ENST00000573584 RETREG1Q9H6L5 497 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 FBXO10Q9UK96 956 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 OARD1Q9Y530 152 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 M0R3G1 203 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 VNN2O95498 520 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 ZNF7P17097 686 aaPredicted RBP15.3■□□□□ 0.04
NUP88-207ENST00000573584 CTPS1P17812 591 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 MAGEA10P43363 369 aaPredicted RBP15.3■□□□□ 0.04
NUP88-207ENST00000573584 GPR17Q13304 367 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 ZC3H12BQ5HYM0 836 aaKnown RBP15.3■□□□□ 0.04
NUP88-207ENST00000573584 C17orf99Q6UX52 265 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 FAM151BQ6UXP7 276 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 CERS6Q6ZMG9 384 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 SERPINA9Q86WD7 417 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 CLDN19Q8N6F1 224 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 ULK4Q96C45 1275 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 MTFMTQ96DP5 389 aaKnown RBP15.3■□□□□ 0.04
NUP88-207ENST00000573584 MROQ9BYG7 248 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 BRCA2P51587 3418 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 TRBV5-3A0A0A0MS03 114 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 KRBA1A5PL33 1030 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 FAM220BPB1ANY3 271 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 LOC730098B7Z3J9 87 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 AREL1O15033 823 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 SLC25A14O95258 325 aaPredicted RBP15.3■□□□□ 0.04
NUP88-207ENST00000573584 GJB5O95377 273 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 GSNP06396 782 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 BCKDHAP12694 445 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 IGFBP5P24593 272 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 HMGCLP35914 325 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 RXRGP48443 463 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 LSM3P62310 102 aaKnown RBP15.3■□□□□ 0.04
NUP88-207ENST00000573584 ARF5P84085 180 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms