RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 SERTAD3Q9UJW9 196 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 RIMKLBQ9ULI2 386 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 PLAGL1Q9UM63 463 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 SNX7Q9UNH6 387 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 FARSAQ9Y285 508 aaKnown RBP9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 TP53TG5Q9Y2B4 290 aa9.35□□□□□ -0.91
NPLOC4-212ENST00000573328 SEC16AO15027 2179 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 A0A0J9YY10 115 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 SLC5A10A0PJK1 596 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 ISM1B1AKI9 464 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 C9J4A7 227 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 RPN2P04844 631 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 APOA4P06727 396 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 CHRM5P08912 532 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 CXCR5P32302 372 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 RPL22P35268 128 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 TTPAP49638 278 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 PMS2P54278 862 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 CRADDP78560 199 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 IL10RAQ13651 578 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 SEMA3AQ14563 771 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 PCID2Q5JVF3 399 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 COLEC12Q5KU26 742 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 PTRHD1Q6GMV3 140 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 C4orf22Q6V702 233 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 UNC5AQ6ZN44 842 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 LDB1Q86U70 411 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 TAX1BP1Q86VP1 789 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 SYTL1Q8IYJ3 562 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 DSELQ8IZU8 1212 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 ENDOVQ8N8Q3 282 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 SKA2Q8WVK7 121 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 PITPNM3Q9BZ71 974 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 EPN3Q9H201 632 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 ACSS2Q9NR19 701 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 EIF2B3Q9NR50 452 aaKnown RBP9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 CHRAC1Q9NRG0 131 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 BFARQ9NZS9 450 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 GNPTGQ9UJJ9 305 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 ANAPC2Q9UJX6 822 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 TTC7AQ9ULT0 858 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 ZKSCAN5Q9Y2L8 839 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 ANKRD12Q6UB98 2062 aa9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 UBR5O95071 2799 aaPredicted RBP9.34□□□□□ -0.91
NPLOC4-212ENST00000573328 ARGFXA6NJG6 315 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 IQCF5A8MTL0 148 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 AP3B1O00203 1094 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 MEN1O00255 615 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 PRMT5O14744 637 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 CD3EAPO15446 510 aaKnown RBP9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 ZNF749O43361 778 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 NDUFS3O75489 264 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 DNAJB5O75953 348 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 OR2B3O76000 313 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 HBQ1P09105 142 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 AGXTP21549 392 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 PSMA3P25788 255 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 ACADLP28330 430 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 KCNJ1P48048 391 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 VPS41P49754 854 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 ACVR1Q04771 509 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 KLRB1Q12918 225 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 CHAF1BQ13112 559 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 SIX1Q15475 284 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 TRIP13Q15645 432 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 UGT8Q16880 541 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 PTCHD3Q3KNS1 767 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 DNAJC21Q5F1R6 531 aaKnown RBP9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 IZUMO3Q5VZ72 239 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 CPZQ66K79 652 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 TTC23LQ6PF05 361 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 DRICH1Q6PGQ1 229 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 CDHR3Q6ZTQ4 885 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 ASB18Q6ZVZ8 466 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 ZNF534Q76KX8 674 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 LRRC8AQ8IWT6 810 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 KRT222Q8N1A0 295 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 TEX19Q8NA77 164 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 SLC38A9Q8NBW4 561 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 LKAAEAR1Q8TD35 194 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 ASZ1Q8WWH4 475 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 THAP4Q8WY91 577 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 PEX13Q92968 403 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 TCTN2Q96GX1 697 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 LRFN5Q96NI6 719 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 PANX3Q96QZ0 392 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 AP1M1Q9BXS5 423 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 IL22Q9GZX6 179 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 TXLNGQ9NUQ3 528 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 SPHK1Q9NYA1 384 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 OR6C2Q9NZP2 312 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 CIDEBQ9UHD4 219 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 GPN3Q9UHW5 284 aaPredicted RBP9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 TSR3Q9UJK0 312 aaKnown RBP9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 TLK1Q9UKI8 766 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 SLC39A10Q9ULF5 831 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 PADI2Q9Y2J8 665 aa9.33□□□□□ -0.92
NPLOC4-212ENST00000573328 MDC1Q14676 2089 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-212ENST00000573328 FLNBO75369 2602 aaKnown RBP9.32□□□□□ -0.92
NPLOC4-212ENST00000573328 BHMG1C9JSJ3 638 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms