RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 SH3GLB1Q9Y371 365 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 ZNF451Q9Y4E5 1061 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 TTC36A6NLP5 189 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 GRM6O15303 877 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 SNUPNO95149 360 aaKnown RBP15.86■□□□□ 0.13
RAB40B-206ENST00000571995 TRBC1P01850 177 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 PTNP21246 168 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 CA5AP35218 305 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 HERC3Q15034 1050 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 ANKRD34AQ69YU3 496 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 HMGCLL1Q8TB92 370 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 RANBP9Q96S59 729 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 IMP3Q9NV31 184 aaKnown RBP15.86■□□□□ 0.13
RAB40B-206ENST00000571995 SMOXQ9NWM0 555 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 PLXNB2O15031 1838 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 STK25O00506 426 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 TOR1BO14657 336 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 POP4O95707 220 aaKnown RBP15.86■□□□□ 0.13
RAB40B-206ENST00000571995 CATP04040 527 aaKnown RBP15.86■□□□□ 0.13
RAB40B-206ENST00000571995 ROR2Q01974 943 aaKnown RBP15.86■□□□□ 0.13
RAB40B-206ENST00000571995 HKDC1Q2TB90 917 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 PRMT9Q6P2P2 845 aa15.86■□□□□ 0.13
RAB40B-206ENST00000571995 ALPK2Q86TB3 2170 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 H3BM21 787 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 SERPINA1P01009 418 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 RHOP08100 348 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 PSMB9P28065 219 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 GPC1P35052 558 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 NSG1P42857 185 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 ATP1A4Q13733 1029 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 PCBP2Q15366 365 aaKnown RBP eCLIP15.85■□□□□ 0.132e-6■■■■■ 46.1
RAB40B-206ENST00000571995 CCSAPQ6IQ19 270 aaPredicted RBP15.85■□□□□ 0.13
RAB40B-206ENST00000571995 ENPP6Q6UWR7 440 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 CERS6Q6ZMG9 384 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 NXPE1Q8N323 547 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 OR4K1Q8NGD4 311 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 ZFP28Q8NHY6 868 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 COL26A1Q96A83 441 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 DGCR14Q96DF8 476 aaKnown RBP15.85■□□□□ 0.13
RAB40B-206ENST00000571995 BTBD9Q96Q07 612 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 DUS2Q9NX74 493 aaKnown RBP15.85■□□□□ 0.13
RAB40B-206ENST00000571995 DHRS7Q9Y394 339 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 K7EPI3 171 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 HMGCLP35914 325 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 ERVFC1P60507 584 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 GRIN2CQ14957 1233 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 BLOC1S3Q6QNY0 202 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 B3GNT6Q6ZMB0 384 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 CYP2U1Q7Z449 544 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 DCAF4L2Q8NA75 395 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 DOK4Q8TEW6 326 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 RPF2Q9H7B2 306 aaKnown RBP15.85■□□□□ 0.13
RAB40B-206ENST00000571995 KCTD5Q9NXV2 234 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 NUDT4Q9NZJ9 180 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 VAPAQ9P0L0 249 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 CXXC1Q9P0U4 656 aaPredicted RBP15.85■□□□□ 0.13
RAB40B-206ENST00000571995 MAP4K5Q9Y4K4 846 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 SPTBP11277 2137 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 KNTC1P50748 2209 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 WASH4PA8MWX3 477 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 SLC31A1O15431 190 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 VPS4BO75351 444 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 PCCBP05166 539 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 PAX3P23760 479 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 GRM2Q14416 872 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 TPGS2Q68CL5 300 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 SLC8B1Q6J4K2 584 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 CRTC1Q6UUV9 634 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 BEND5Q7L4P6 421 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 OSCP1Q8WVF1 389 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 BADQ92934 168 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 TMBIM1Q969X1 311 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 FAM192AQ9GZU8 254 aa15.85■□□□□ 0.13
RAB40B-206ENST00000571995 CLK4Q9HAZ1 481 aaKnown RBP15.85■□□□□ 0.13
RAB40B-206ENST00000571995 TSPAN6O43657 245 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 AHCYL1O43865 530 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 NR1H2P55055 460 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 CARD16Q5EG05 197 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 CNKSR3Q6P9H4 555 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 SPATA19Q7Z5L4 167 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 TEX26Q8N6G2 289 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 JPH3Q8WXH2 748 aaPredicted RBP15.84■□□□□ 0.13
RAB40B-206ENST00000571995 ACDQ96AP0 544 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 CENPNQ96H22 339 aaPredicted RBP15.84■□□□□ 0.13
RAB40B-206ENST00000571995 OR51B5Q9H339 312 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 RAB26Q9ULW5 256 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 HCFC2Q9Y5Z7 792 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 IGLV3-10A0A075B6K4 115 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 ACOT8O14734 319 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 TPST2O60704 377 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 SRCP12931 536 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 IL12AP29459 219 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 MERTKQ12866 999 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 GDPD4Q6W3E5 623 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 VPS37AQ8NEZ2 397 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 SLC47A1Q96FL8 570 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 TSEN34Q9BSV6 310 aaKnown RBP15.84■□□□□ 0.13
RAB40B-206ENST00000571995 KLF16Q9BXK1 252 aaPredicted RBP15.84■□□□□ 0.13
RAB40B-206ENST00000571995 PNPLA3Q9NST1 481 aa15.84■□□□□ 0.13
RAB40B-206ENST00000571995 SNX6Q9UNH7 406 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms