RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SYTL2Q9HCH5 934 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 ATP13A2Q9NQ11 1180 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 EIF2B3Q9NR50 452 aaKnown RBP11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 LATS2Q9NRM7 1088 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 ZKSCAN5Q9Y2L8 839 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 BSNQ9UPA5 3926 aa11.99□□□□□ -0.49
CTDNEP1-205ENST00000570828 TMEM150CB9EJG8 249 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 SUV39H1O43463 412 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 KDM1AO60341 852 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 OR1I1O60431 355 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 KLK3P07288 261 aaPredicted RBP11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 ZSCAN5DPP0CG00 497 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 CYP2A7P20853 494 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 RPL22P35268 128 aaKnown RBP11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 RPS15P62841 145 aaKnown RBP11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 ACVR1Q04771 509 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 SIX1Q15475 284 aaPredicted RBP11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 DRICH1Q6PGQ1 229 aaPredicted RBP11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 SPESP1Q6UW49 350 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 C4orf22Q6V702 233 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 PTRH1Q86Y79 214 aaKnown RBP11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 TBC1D21Q8IYX1 336 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 PEX13Q92968 403 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 MR1Q95460 341 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 THAP11Q96EK4 314 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 ZNF778Q96MU6 729 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 ZNF71Q9NQZ8 489 aaPredicted RBP11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 CATSPERZQ9NTU4 200 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 ACTR10Q9NZ32 417 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 POLG2Q9UHN1 485 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 ANAPC5Q9UJX4 755 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 ICKQ9UPZ9 632 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 MAN2B2Q9Y2E5 1009 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 TDRKHQ9Y2W6 561 aaKnown RBP11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 KCNMB2Q9Y691 235 aa11.98□□□□□ -0.49
CTDNEP1-205ENST00000570828 MYO18BQ8IUG5 2567 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 SLC5A10A0PJK1 596 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 MKRN2OSH3BPM6 223 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 AP3B1O00203 1094 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 CEP104O60308 925 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 RFPL1O75677 317 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 WISP1O95388 367 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 RECKO95980 971 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 MSL3P1P0C860 447 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 PVRP15151 417 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 ST6GAL1P15907 406 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 ACADLP28330 430 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 PTPN4P29074 926 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 CSE1LP55060 971 aaKnown RBP11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 SESN2P58004 480 aaPredicted RBP11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 GPS2Q13227 327 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 LACTB2Q53H82 288 aaPredicted RBP11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 PCID2Q5JVF3 399 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 FAM199XQ6PEV8 388 aaPredicted RBP11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 NAPRTQ6XQN6 538 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 ZNF534Q76KX8 674 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 LRRC8AQ8IWT6 810 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 ADGRF3Q8IZF5 1079 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 OR5K2Q8NHB8 316 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 N4BP2L2Q92802 583 aaPredicted RBP11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 CLIP3Q96DZ5 547 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 ABHD17AQ96GS6 310 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 SGSM3Q96HU1 749 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 TRAPPC9Q96Q05 1148 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 NRTNQ99748 197 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 SLC7A5P2Q9GIP4 190 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 IL22Q9GZX6 179 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 KLHL25Q9H0H3 589 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 CLMPQ9H6B4 373 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 HOMER3Q9NSC5 361 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 OR6C2Q9NZP2 312 aa11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 DRG1Q9Y295 367 aaKnown RBP11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 SETXQ7Z333 2677 aaKnown RBP11.97□□□□□ -0.49
CTDNEP1-205ENST00000570828 E7EQ34 232 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 RPN2P04844 631 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 CHRM5P08912 532 aaPredicted RBP11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 FURINP09958 794 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 SNRPBP14678 240 aaKnown RBP11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 UGT2B7P16662 529 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 TTPAP49638 278 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 CSRP3P50461 194 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 PMS2P54278 862 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 ITGA1P56199 1179 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 RPS18P62269 152 aaKnown RBP11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 CRADDP78560 199 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 HSPA14Q0VDF9 509 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 ABRQ12979 859 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 SEMA3AQ14563 771 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 TMED2Q15363 201 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 UGT8Q16880 541 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 DNAJC21Q5F1R6 531 aaKnown RBP11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 PRAMEF17Q5VTA0 474 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 UNC5AQ6ZN44 842 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 SYVN1Q86TM6 617 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 TMEM135Q86UB9 458 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 TRIM73Q86UV7 250 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 GPR135Q8IZ08 494 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 OTUD6BQ8N6M0 293 aa11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 C19orf47Q8N9M1 422 aaKnown RBP11.96□□□□□ -0.49
CTDNEP1-205ENST00000570828 OR1L3Q8NH93 324 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms