RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 COQ8BQ96D53 544 aa3.65□□□□□ -1.83
UBR1-211ENST00000569971 DACH2Q96NX9 599 aa3.65□□□□□ -1.83
UBR1-211ENST00000569971 SMC6Q96SB8 1091 aa3.65□□□□□ -1.83
UBR1-211ENST00000569971 NUP85Q9BW27 656 aa3.65□□□□□ -1.83
UBR1-211ENST00000569971 KRTAP1-5Q9BYS1 174 aa3.65□□□□□ -1.83
UBR1-211ENST00000569971 CRNKL1Q9BZJ0 848 aaKnown RBP3.65□□□□□ -1.83
UBR1-211ENST00000569971 FOXP1Q9H334 677 aaPredicted RBP3.65□□□□□ -1.83
UBR1-211ENST00000569971 RAD21L1Q9H4I0 556 aa3.65□□□□□ -1.83
UBR1-211ENST00000569971 CHMP1AQ9HD42 196 aaPredicted RBP3.65□□□□□ -1.83
UBR1-211ENST00000569971 PFDN4Q9NQP4 134 aa3.65□□□□□ -1.83
UBR1-211ENST00000569971 RBM28Q9NW13 759 aaKnown RBP3.65□□□□□ -1.83
UBR1-211ENST00000569971 TUBA8Q9NY65 449 aaPredicted RBP3.65□□□□□ -1.83
UBR1-211ENST00000569971 STK39Q9UEW8 545 aa3.65□□□□□ -1.83
UBR1-211ENST00000569971 BTBD3Q9Y2F9 522 aa3.65□□□□□ -1.83
UBR1-211ENST00000569971 SQORQ9Y6N5 450 aa3.65□□□□□ -1.83
UBR1-211ENST00000569971 BCORQ6W2J9 1755 aa3.65□□□□□ -1.83
UBR1-211ENST00000569971 PDS5AQ29RF7 1337 aaKnown RBP3.65□□□□□ -1.83
UBR1-211ENST00000569971 COL5A3P25940 1745 aaPredicted RBP3.64□□□□□ -1.83
UBR1-211ENST00000569971 A0A0B4J293 547 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 DNAJC9-AS1A6NH13 148 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 H0Y626 953 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 H0YGN5 161 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 H0YIN7 160 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 WNT9BO14905 357 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 SLC7A4O43246 635 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 RANBP6O60518 1105 aaKnown RBP3.64□□□□□ -1.83
UBR1-211ENST00000569971 TOM1O60784 492 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 CREG1O75629 220 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 SMC2O95347 1197 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 MMP1P03956 469 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 FGF2P09038 288 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 NR2F2P24468 414 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 HRH2P25021 359 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 MARCKSP29966 332 aaPredicted RBP3.64□□□□□ -1.83
UBR1-211ENST00000569971 BDKRB2P30411 391 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 STX2P32856 288 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 APOBEC1P41238 236 aaKnown RBP3.64□□□□□ -1.83
UBR1-211ENST00000569971 GYG1P46976 350 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 ALDH7A1P49419 539 aaKnown RBP3.64□□□□□ -1.83
UBR1-211ENST00000569971 RAB28P51157 221 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 SIRPAP78324 504 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 MYL5Q02045 173 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 MAD2L1Q13257 205 aaPredicted RBP3.64□□□□□ -1.83
UBR1-211ENST00000569971 TNIP1Q15025 636 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 RBMS2Q15434 407 aaKnown RBP3.64□□□□□ -1.83
UBR1-211ENST00000569971 TRIP6Q15654 476 aaKnown RBP3.64□□□□□ -1.83
UBR1-211ENST00000569971 ATP13A5Q4VNC0 1218 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 SLC10A5Q5PT55 438 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 DCST1Q5T197 706 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 MORN5Q5VZ52 161 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 RESP18Q5W5W9 173 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 LCN10Q6JVE6 187 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 PAPD4Q6PIY7 484 aaKnown RBP3.64□□□□□ -1.83
UBR1-211ENST00000569971 SHC4Q6S5L8 630 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 TRAPPC11Q7Z392 1133 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 PIP4P1Q86T03 277 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 METTL23Q86XA0 190 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 NBPF5PQ86XG9 351 aaPredicted RBP3.64□□□□□ -1.83
UBR1-211ENST00000569971 LRRC8AQ8IWT6 810 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 AADATQ8N5Z0 425 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 ZNF713Q8N859 430 aaPredicted RBP3.64□□□□□ -1.83
UBR1-211ENST00000569971 CNNM3Q8NE01 707 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 ZNF548Q8NEK5 533 aaPredicted RBP3.64□□□□□ -1.83
UBR1-211ENST00000569971 OR10S1Q8NGN2 331 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 C16orf52Q8NHV5 167 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 PIGOQ8TEQ8 1089 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 LPAR1Q92633 364 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 RPL36ALQ969Q0 106 aaKnown RBP3.64□□□□□ -1.83
UBR1-211ENST00000569971 SLC25A28Q96A46 364 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 HDAC11Q96DB2 347 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 URB1-AS1Q96HZ7 61 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 LRFN5Q96NI6 719 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 FNBP1Q96RU3 617 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 GFI1Q99684 422 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 SEMA3CQ99985 751 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 KXD1Q9BQD3 176 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 GPATCH1Q9BRR8 931 aaKnown RBP3.64□□□□□ -1.83
UBR1-211ENST00000569971 SYT17Q9BSW7 474 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 HGH1Q9BTY7 390 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 TMEM39BQ9GZU3 492 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 CATSPERBQ9H7T0 1116 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 XAB2Q9HCS7 855 aaKnown RBP3.64□□□□□ -1.83
UBR1-211ENST00000569971 ABCF3Q9NUQ8 709 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 DDX25Q9UHL0 483 aaKnown RBP3.64□□□□□ -1.83
UBR1-211ENST00000569971 RASAL2Q9UJF2 1139 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 TINAGQ9UJW2 476 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 PYCARDQ9ULZ3 195 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 B3GALT5Q9Y2C3 310 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 PAM16Q9Y3D7 125 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 HS3ST3B1Q9Y662 390 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 SCN7AQ01118 1682 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 SLIT2O94813 1529 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 CHD4Q14839 1912 aa3.64□□□□□ -1.83
UBR1-211ENST00000569971 MAST2Q6P0Q8 1798 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 BCL9LQ86UU0 1499 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 WDR91A4D1P6 747 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 J3QR06 171 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 SPINT2O43291 252 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 PRKAB2O43741 272 aa3.63□□□□□ -1.83
UBR1-211ENST00000569971 NDUFS7O75251 213 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms