RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 PSMA3P25788 255 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 PDHA2P29803 388 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 MLLT10P55197 1068 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 ABRQ12979 859 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 KIR2DS3Q14952 304 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 ZNF658BQ4V348 819 aaPredicted RBP18■□□□□ 0.47
LINC01238-205ENST00000567549 DNAJC21Q5F1R6 531 aaKnown RBP18■□□□□ 0.47
LINC01238-205ENST00000567549 TTC23LQ6PF05 361 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 FBXO38Q6PIJ6 1188 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 ADGRF3Q8IZF5 1079 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 RAB42Q8N4Z0 105 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 CLEC1AQ8NC01 280 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 SLC35B2Q8TB61 432 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 ADAMTS17Q8TE56 1095 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 NAT14Q8WUY8 206 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 TM9SF4Q92544 642 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 DLG3Q92796 817 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 VPS50Q96JG6 964 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 TMEM121Q9BTD3 319 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 TRIM55Q9BYV6 548 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 TSGA10Q9BZW7 698 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 LACRTQ9GZZ8 138 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 AKIRIN1Q9H9L7 192 aaPredicted RBP18■□□□□ 0.47
LINC01238-205ENST00000567549 LRRC4CQ9HCJ2 640 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 SLAMF7Q9NQ25 335 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 INTS7Q9NVH2 962 aaKnown RBP18■□□□□ 0.47
LINC01238-205ENST00000567549 C5AR2Q9P296 337 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 TDRKHQ9Y2W6 561 aaKnown RBP18■□□□□ 0.47
LINC01238-205ENST00000567549 SEC16AO15027 2179 aa18■□□□□ 0.47
LINC01238-205ENST00000567549 CLEC18AA5D8T8 446 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 CEACAM4O75871 244 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 METTL18O95568 372 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 CHRM5P08912 532 aaPredicted RBP17.99■□□□□ 0.47
LINC01238-205ENST00000567549 PIM1P11309 404 aaPredicted RBP17.99■□□□□ 0.47
LINC01238-205ENST00000567549 FOLR3P41439 243 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 PRAMEP78395 509 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 SRSF1Q07955 248 aaKnown RBP eCLIP17.99■□□□□ 0.47
LINC01238-205ENST00000567549 KLF1Q13351 362 aaPredicted RBP17.99■□□□□ 0.47
LINC01238-205ENST00000567549 SSPNQ14714 243 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 TMED2Q15363 201 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 SLC5A12Q1EHB4 618 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 FHL5Q5TD97 284 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 RHBDD2Q6NTF9 364 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 FAM198BQ6UWH4 519 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 CLEC18BQ6UXF7 455 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 CDHR3Q6ZTQ4 885 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 RNF10Q8N5U6 811 aaKnown RBP17.99■□□□□ 0.47
LINC01238-205ENST00000567549 GLIS1Q8NBF1 620 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 SPC24Q8NBT2 197 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 SLC38A9Q8NBW4 561 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 CLEC18CQ8NCF0 446 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 ACRBPQ8NEB7 543 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 ASZ1Q8WWH4 475 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 PPM1MQ96MI6 270 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 RANBP9Q96S59 729 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 RUFY1Q96T51 708 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 NDC1Q9BTX1 674 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 RAB11FIP5Q9BXF6 653 aa17.99■□□□□ 0.47
LINC01238-205ENST00000567549 KPNA5O15131 536 aa17.98■□□□□ 0.47
LINC01238-205ENST00000567549 FKBP9O95302 570 aa17.98■□□□□ 0.47
LINC01238-205ENST00000567549 APOA4P06727 396 aa17.98■□□□□ 0.47
LINC01238-205ENST00000567549 UGT2B7P16662 529 aa17.98■□□□□ 0.47
LINC01238-205ENST00000567549 ADRA1DP25100 572 aa17.98■□□□□ 0.47
LINC01238-205ENST00000567549 CDKN1CP49918 316 aaPredicted RBP17.98■□□□□ 0.47
LINC01238-205ENST00000567549 DCDP81605 110 aaKnown RBP17.98■□□□□ 0.47
LINC01238-205ENST00000567549 CHAF1BQ13112 559 aa17.98■□□□□ 0.47
LINC01238-205ENST00000567549 FASTKD1Q53R41 847 aaKnown RBP17.98■□□□□ 0.47
LINC01238-205ENST00000567549 CPZQ66K79 652 aa17.98■□□□□ 0.47
LINC01238-205ENST00000567549 AADACL2Q6P093 401 aa17.98■□□□□ 0.47
LINC01238-205ENST00000567549 RAD9BQ6WBX8 426 aa17.98■□□□□ 0.47
LINC01238-205ENST00000567549 UNC5AQ6ZN44 842 aa17.98■□□□□ 0.47
LINC01238-205ENST00000567549 CCDC89Q8N998 374 aa17.98■□□□□ 0.47
LINC01238-205ENST00000567549 OR5AR1Q8NGP9 310 aa17.98■□□□□ 0.47
LINC01238-205ENST00000567549 NACC2Q96BF6 587 aa17.98■□□□□ 0.47
LINC01238-205ENST00000567549 XKR8Q9H6D3 395 aa17.98■□□□□ 0.47
LINC01238-205ENST00000567549 IFT80Q9P2H3 777 aaPredicted RBP17.98■□□□□ 0.47
LINC01238-205ENST00000567549 ICKQ9UPZ9 632 aa17.98■□□□□ 0.47
LINC01238-205ENST00000567549 SPTBP11277 2137 aa17.98■□□□□ 0.47
LINC01238-205ENST00000567549 RP1L1Q8IWN7 2480 aaPredicted RBP17.97■□□□□ 0.47
LINC01238-205ENST00000567549 MAST4O15021 2626 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 ISM1B1AKI9 464 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 K7EM74 188 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 PFDN6O15212 129 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 ZSCAN9O15535 394 aaPredicted RBP17.97■□□□□ 0.47
LINC01238-205ENST00000567549 AGFG2O95081 481 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 ACADLP28330 430 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 FOXN2P32314 431 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 ARSFP54793 590 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 PTCHD3Q3KNS1 767 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 ZNF789Q5FWF6 425 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 VWA5B1Q5TIE3 1220 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 C4orf22Q6V702 233 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 PIANPQ8IYJ0 282 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 PPHLN1Q8NEY8 458 aaKnown RBP17.97■□□□□ 0.47
LINC01238-205ENST00000567549 OR52K1Q8NGK4 314 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 OR6P1Q8NGX9 317 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 OR4L1Q8NH43 312 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 PNPLA2Q96AD5 504 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 HES6Q96HZ4 224 aa17.97■□□□□ 0.47
LINC01238-205ENST00000567549 PLCL2Q9UPR0 1127 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms