RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 HOOK3Q86VS8 718 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 KCNMB4Q86W47 210 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 FAM20CQ8IXL6 584 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 OR5AR1Q8NGP9 310 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 P3H4Q92791 437 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 OR2A14Q96R47 310 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 COPS8Q99627 209 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 WDR77Q9BQA1 342 aaPredicted RBP14.94□□□□□ -0.02
PALB2-205ENST00000567003 UNKQ9C0B0 810 aaKnown RBP14.94□□□□□ -0.02
PALB2-205ENST00000567003 GBA3Q9H227 469 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 MVB12BQ9H7P6 319 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 SLC6A20Q9NP91 592 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 IRAK4Q9NWZ3 460 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 FBXL4Q9UKA2 621 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 PLAGL1Q9UM63 463 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 ADGRG4Q8IZF6 3080 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 PDZD2O15018 2839 aa14.94□□□□□ -0.02
PALB2-205ENST00000567003 hCG_1818297A0A087WSY0 165 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 AGAP14A8MT82 685 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 ZSCAN9O15535 394 aaPredicted RBP14.93□□□□□ -0.02
PALB2-205ENST00000567003 ZG16O60844 167 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 ITGALP20701 1170 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 PSMB4P28070 264 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 RBL1P28749 1068 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 ADRA1AP35348 466 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 GEMP55040 296 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 NKAIN1Q4KMZ8 207 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 MRPL14Q6P1L8 145 aaKnown RBP14.93□□□□□ -0.02
PALB2-205ENST00000567003 UNC5AQ6ZN44 842 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 CCDC50Q8IVM0 306 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 CLDN19Q8N6F1 224 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 FLVCR1-AS1Q8TAF5 88 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 PROKR1Q8TCW9 393 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 GRHL3Q8TE85 626 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 TM9SF4Q92544 642 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 TFGQ92734 400 aaPredicted RBP14.93□□□□□ -0.02
PALB2-205ENST00000567003 PTERQ96BW5 349 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 ULK4Q96C45 1275 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 IQCDQ96DY2 449 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 CNDP1Q96KN2 507 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 CHP1Q99653 195 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 C17orf62Q9BQA9 187 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 ATP13A2Q9NQ11 1180 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 AGPAT4Q9NRZ5 378 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 SLC22A11Q9NSA0 550 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 KLHL20Q9Y2M5 609 aa14.93□□□□□ -0.02
PALB2-205ENST00000567003 F8P00451 2351 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 C17orf113A0A1B0GUU1 675 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 CFAP99D6REC4 459 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 IPO13O94829 963 aaKnown RBP14.92□□□□□ -0.02
PALB2-205ENST00000567003 TPBGLP0DKB5 382 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 ITGAXP20702 1163 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 ELAVL4P26378 380 aaKnown RBP14.92□□□□□ -0.02
PALB2-205ENST00000567003 PEBP1P30086 187 aaKnown RBP14.92□□□□□ -0.02
PALB2-205ENST00000567003 MC4RP32245 332 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 TPM4P67936 248 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 MSLNQ13421 630 aaPredicted RBP14.92□□□□□ -0.02
PALB2-205ENST00000567003 SPARCL1Q14515 664 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 BRD3Q15059 726 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 RANBP10Q6VN20 620 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 NAPRTQ6XQN6 538 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 SNX20Q7Z614 316 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 RHOT2Q8IXI1 618 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 DNAJC1Q96KC8 554 aaKnown RBP14.92□□□□□ -0.02
PALB2-205ENST00000567003 VAT1Q99536 393 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 AP1M1Q9BXS5 423 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 TXLNGQ9NUQ3 528 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 ZDHHC3Q9NYG2 299 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 TRHDEQ9UKU6 1024 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 TDRKHQ9Y2W6 561 aaKnown RBP14.92□□□□□ -0.02
PALB2-205ENST00000567003 AP1M2Q9Y6Q5 423 aa14.92□□□□□ -0.02
PALB2-205ENST00000567003 A0A0J9YY10 115 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 CCDC78A2IDD5 438 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 C5orf60A6NFR6 353 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 H7C0C1 242 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 AGPSO00116 658 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 HNRNPRO43390 633 aaKnown RBP14.91□□□□□ -0.02
PALB2-205ENST00000567003 IGHEP01854 428 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 CHRM5P08912 532 aaPredicted RBP14.91□□□□□ -0.02
PALB2-205ENST00000567003 SLC1A1P43005 524 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 ATP5OP48047 213 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 CD151P48509 253 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 SOX8P57073 446 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 ZRSR2Q15696 482 aaKnown RBP14.91□□□□□ -0.02
PALB2-205ENST00000567003 TFDP3Q5H9I0 405 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 MYO7BQ6PIF6 2116 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 SHISA6Q6ZSJ9 500 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 FJX1Q86VR8 437 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 SERPINA9Q86WD7 417 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 DNAJC22Q8N4W6 341 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 LMNTD1Q8N9Z9 388 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 DNAJB14Q8TBM8 379 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.91□□□□□ -0.02
PALB2-205ENST00000567003 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.91□□□□□ -0.02
PALB2-205ENST00000567003 DNAJC7Q99615 494 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 MESP1Q9BRJ9 268 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 HEMGNQ9BXL5 484 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 CDC23Q9UJX2 597 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 PRSS21Q9Y6M0 314 aa14.91□□□□□ -0.02
PALB2-205ENST00000567003 DCHS2Q6V1P9 2916 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms