RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ASB18Q6ZVZ8 466 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 SYTL1Q8IYJ3 562 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 TBC1D21Q8IYX1 336 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 OR5K2Q8NHB8 316 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 FLVCR1-AS1Q8TAF5 88 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 ADAMTS17Q8TE56 1095 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 OR2A14Q96R47 310 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 TSGA10Q9BZW7 698 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 FAM60AQ9NP50 221 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 RAB6BQ9NRW1 208 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 SPHK1Q9NYA1 384 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 SERTAD3Q9UJW9 196 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 TDRKHQ9Y2W6 561 aaKnown RBP17.72■□□□□ 0.43
USB1-213ENST00000566292 TCAF1Q9Y4C2 921 aa17.72■□□□□ 0.43
USB1-213ENST00000566292 COL12A1Q99715 3063 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 CYSRT1A8MQ03 144 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 E7EVH7 732 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 HCRTR1O43613 425 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 KRT86O43790 486 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 CHRM5P08912 532 aaPredicted RBP17.71■□□□□ 0.43
USB1-213ENST00000566292 ZSCAN5DPP0CG00 497 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 CSE1LP55060 971 aaKnown RBP17.71■□□□□ 0.43
USB1-213ENST00000566292 ITGA1P56199 1179 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 PTCHD3Q3KNS1 767 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 SYTL3Q4VX76 610 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 MEI1Q5TIA1 1274 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 ZNF385CQ66K41 422 aaPredicted RBP17.71■□□□□ 0.43
USB1-213ENST00000566292 C19orf47Q8N9M1 422 aaKnown RBP17.71■□□□□ 0.43
USB1-213ENST00000566292 OR4L1Q8NH43 312 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 LKAAEAR1Q8TD35 194 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 NLNQ9BYT8 704 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 POLG2Q9UHN1 485 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 TCFL5Q9UL49 500 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 PLAGL1Q9UM63 463 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 SNX7Q9UNH6 387 aa17.71■□□□□ 0.43
USB1-213ENST00000566292 ARGFXA6NJG6 315 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 H3BMH7 237 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 MAP3K7O43318 606 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 ZNF749O43361 778 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 APRTP07741 180 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 PEBP1P30086 187 aaKnown RBP17.7■□□□□ 0.42
USB1-213ENST00000566292 CCR7P32248 378 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 RPL22P35268 128 aaKnown RBP17.7■□□□□ 0.42
USB1-213ENST00000566292 PTGIRP43119 386 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 GABRA4P48169 554 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 PLOD1Q02809 727 aaPredicted RBP17.7■□□□□ 0.42
USB1-213ENST00000566292 DEFB110Q30KQ9 67 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 VRK3Q8IV63 474 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 TEX19Q8NA77 164 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 OR6P1Q8NGX9 317 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 SGSM3Q96HU1 749 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 ING2Q9H160 280 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 PAK5Q9P286 719 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 CDYLQ9Y232 598 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 PLAAQ9Y263 795 aa17.7■□□□□ 0.42
USB1-213ENST00000566292 LRRK2Q5S007 2527 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 ANKRD12Q6UB98 2062 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 E7EQ34 232 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 CTSBP07858 339 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 CCL11P51671 97 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 PRAMEP78395 509 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 RPS6KA1Q15418 735 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 FASTKD1Q53R41 847 aaKnown RBP17.69■□□□□ 0.42
USB1-213ENST00000566292 NLRP9Q7RTR0 991 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 LDB1Q86U70 411 aaPredicted RBP17.69■□□□□ 0.42
USB1-213ENST00000566292 HOOK3Q86VS8 718 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 SLC22A15Q8IZD6 547 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 CCDC89Q8N998 374 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 UBE2Q2Q8WVN8 375 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 PEX13Q92968 403 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 TCTN2Q96GX1 697 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 TTC1Q99614 292 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 AP1M1Q9BXS5 423 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 OR6C2Q9NZP2 312 aa17.69■□□□□ 0.42
USB1-213ENST00000566292 A0A0J9YY10 115 aa17.68■□□□□ 0.42
USB1-213ENST00000566292 IQCF5A8MTL0 148 aa17.68■□□□□ 0.42
USB1-213ENST00000566292 GPC4O75487 556 aa17.68■□□□□ 0.42
USB1-213ENST00000566292 MLLT10P55197 1068 aa17.68■□□□□ 0.42
USB1-213ENST00000566292 NCF4Q15080 339 aa17.68■□□□□ 0.42
USB1-213ENST00000566292 CCNG2Q16589 344 aa17.68■□□□□ 0.42
USB1-213ENST00000566292 PPHLN1Q8NEY8 458 aaKnown RBP17.68■□□□□ 0.42
USB1-213ENST00000566292 MIB2Q96AX9 1013 aa17.68■□□□□ 0.42
USB1-213ENST00000566292 SLC25A23Q9BV35 468 aa17.68■□□□□ 0.42
USB1-213ENST00000566292 CARD6Q9BX69 1037 aa17.68■□□□□ 0.42
USB1-213ENST00000566292 SLC7A5P2Q9GIP4 190 aa17.68■□□□□ 0.42
USB1-213ENST00000566292 CHRNA10Q9GZZ6 450 aa17.68■□□□□ 0.42
USB1-213ENST00000566292 SPRTNQ9H040 489 aaPredicted RBP17.68■□□□□ 0.42
USB1-213ENST00000566292 MLXIPLQ9NP71 852 aa17.68■□□□□ 0.42
USB1-213ENST00000566292 ACSS2Q9NR19 701 aa17.68■□□□□ 0.42
USB1-213ENST00000566292 CHRAC1Q9NRG0 131 aa17.68■□□□□ 0.42
USB1-213ENST00000566292 MARCH4Q9P2E8 410 aaPredicted RBP17.68■□□□□ 0.42
USB1-213ENST00000566292 PCDHGA9Q9Y5G4 932 aaKnown RBP17.68■□□□□ 0.42
USB1-213ENST00000566292 GOLGA6L6A8MZA4 724 aa17.67■□□□□ 0.42
USB1-213ENST00000566292 PKLRP30613 574 aa17.67■□□□□ 0.42
USB1-213ENST00000566292 CRADDP78560 199 aa17.67■□□□□ 0.42
USB1-213ENST00000566292 HSPA14Q0VDF9 509 aa17.67■□□□□ 0.42
USB1-213ENST00000566292 DNAJC21Q5F1R6 531 aaKnown RBP17.67■□□□□ 0.42
USB1-213ENST00000566292 PCID2Q5JVF3 399 aa17.67■□□□□ 0.42
USB1-213ENST00000566292 DRICH1Q6PGQ1 229 aaPredicted RBP17.67■□□□□ 0.42
USB1-213ENST00000566292 FAM20CQ8IXL6 584 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms