RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 OTX2P32243 289 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 CCR7P32248 378 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 FOXN2P32314 431 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 RPL22P35268 128 aaKnown RBP6.2□□□□□ -1.42
TCF4-228ENST00000565393 NPY2RP49146 381 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 DCDP81605 110 aaKnown RBP6.2□□□□□ -1.42
TCF4-228ENST00000565393 UBAP2LQ14157 1087 aaKnown RBP6.2□□□□□ -1.42
TCF4-228ENST00000565393 SSPNQ14714 243 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 SF1Q15637 639 aaKnown RBP6.2□□□□□ -1.42
TCF4-228ENST00000565393 CCNG2Q16589 344 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 KYNUQ16719 465 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 ZNF658BQ4V348 819 aaPredicted RBP6.2□□□□□ -1.42
TCF4-228ENST00000565393 FAM69BQ5VUD6 431 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 AFTPHQ6ULP2 937 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 SPESP1Q6UW49 350 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 PACS1Q6VY07 963 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 SDCCAG8Q86SQ7 713 aaPredicted RBP6.2□□□□□ -1.42
TCF4-228ENST00000565393 SYTL1Q8IYJ3 562 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 KRT222Q8N1A0 295 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 OTUD6BQ8N6M0 293 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 ZNF655Q8N720 491 aaPredicted RBP6.2□□□□□ -1.42
TCF4-228ENST00000565393 EFCAB3Q8N7B9 438 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 OR13J1Q8NGT2 312 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 OR5K2Q8NHB8 316 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 SKA2Q8WVK7 121 aaPredicted RBP6.2□□□□□ -1.42
TCF4-228ENST00000565393 MAIP1Q8WWC4 291 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 ASZ1Q8WWH4 475 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 ZNF778Q96MU6 729 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 OR2A14Q96R47 310 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 RANBP9Q96S59 729 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 NDC1Q9BTX1 674 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 CARD6Q9BX69 1037 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 AP1M1Q9BXS5 423 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 MFRPQ9BY79 579 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 PITPNM3Q9BZ71 974 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 LZTFL1Q9NQ48 299 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 CASS4Q9NQ75 786 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 TXLNGQ9NUQ3 528 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 PCMTD2Q9NV79 361 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 SPHK1Q9NYA1 384 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 OR6C2Q9NZP2 312 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 BFARQ9NZS9 450 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 MAP10Q9P2G4 905 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 IFT80Q9P2H3 777 aaPredicted RBP6.2□□□□□ -1.42
TCF4-228ENST00000565393 CIDEBQ9UHD4 219 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 SLC39A10Q9ULF5 831 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 VPS4AQ9UN37 437 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 PLCL2Q9UPR0 1127 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 ICKQ9UPZ9 632 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 DRG1Q9Y295 367 aaKnown RBP6.2□□□□□ -1.42
TCF4-228ENST00000565393 KLHL20Q9Y2M5 609 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 AP1M2Q9Y6Q5 423 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 BAHCC1Q9P281 2608 aa6.2□□□□□ -1.42
TCF4-228ENST00000565393 DMXL2Q8TDJ6 3036 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 A0A0J9YY10 115 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 KPNA5O15131 536 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 CD3EAPO15446 510 aaKnown RBP6.19□□□□□ -1.42
TCF4-228ENST00000565393 CEP104O60308 925 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 VAPBO95292 243 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 PDGFAP04085 211 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 CD63P08962 238 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 TPBGLP0DKB5 382 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 CBSLP0DN79 551 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 CHRM3P20309 590 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 CD9P21926 228 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 PSMA3P25788 255 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 FMO4P31512 558 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 RORAP35398 523 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 CBSP35520 551 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 FOLR3P41439 243 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 GRIA3P42263 894 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 PTGIRP43119 386 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 KCNJ1P48048 391 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 RRADP55042 308 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 CRADDP78560 199 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 BASP1P80723 227 aaKnown RBP6.19□□□□□ -1.42
TCF4-228ENST00000565393 IL10RAQ13651 578 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 RAPSNQ13702 412 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 SEMA3AQ14563 771 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 KIR2DS3Q14952 304 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 TMED2Q15363 201 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 OASLQ15646 514 aaKnown RBP6.19□□□□□ -1.42
TCF4-228ENST00000565393 ZIC1Q15915 447 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 SLC5A12Q1EHB4 618 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 DEFB110Q30KQ9 67 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 NADK2Q4G0N4 442 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 DNAJC21Q5F1R6 531 aaKnown RBP6.19□□□□□ -1.42
TCF4-228ENST00000565393 AARS2Q5JTZ9 985 aaKnown RBP6.19□□□□□ -1.42
TCF4-228ENST00000565393 MEI1Q5TIA1 1274 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 CPZQ66K79 652 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 TLDC1Q6P9B6 456 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 C4orf22Q6V702 233 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 ZNF517Q6ZMY9 492 aaPredicted RBP6.19□□□□□ -1.42
TCF4-228ENST00000565393 MED25Q71SY5 747 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 VRK3Q8IV63 474 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 MCATQ8IVS2 390 aaKnown RBP6.19□□□□□ -1.42
TCF4-228ENST00000565393 FAM20CQ8IXL6 584 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 DNAJC22Q8N4W6 341 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 RAB42Q8N4Z0 105 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 ZBTB2Q8N680 514 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms