RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 EIF2DP41214 584 aaKnown RBP20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 DAPP51397 102 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 DGKEP52429 567 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 TRAF3Q13114 568 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 CCBE1Q6UXH8 406 aaPredicted RBP20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 CCDC117Q8IWD4 279 aaPredicted RBP20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 PIK3C3Q8NEB9 887 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 OR5K1Q8NHB7 308 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 CDC26Q8NHZ8 85 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ZNF486Q96H40 463 aaPredicted RBP20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 HOXD1Q9GZZ0 328 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ABCC13Q9NSE7 274 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 PDP1Q9P0J1 537 aaPredicted RBP20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 COL1A2P08123 1366 aa20.09■□□□□ 0.81
MAP1LC3B-206ENST00000564844 LCHNA4D1U4 455 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 RGS10O43665 173 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 PCSK1P29120 753 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ZNF33AQ06730 810 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 GPR153Q6NV75 609 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 PAF1Q8N7H5 531 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 DERL2Q9GZP9 239 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 RNF38Q9H0F5 515 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 ACOT13Q9NPJ3 140 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 A0A1W2PQ67 120 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 FKBP9O95302 570 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 GRK4P32298 578 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 FBXL22Q6P050 247 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 FKBP9P1Q75LS8 142 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 GLT6D1Q7Z4J2 308 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 NLGN4XQ8N0W4 816 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 GPRC5AQ8NFJ5 357 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 YIPF6Q96EC8 236 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 TSSK3Q96PN8 268 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 TPRKBQ9Y3C4 175 aa20.08■□□□□ 0.81
MAP1LC3B-206ENST00000564844 UPK1BO75841 260 aa20.08■□□□□ 0.8
MAP1LC3B-206ENST00000564844 GADD45AP24522 165 aa20.08■□□□□ 0.8
MAP1LC3B-206ENST00000564844 AKT1P31749 480 aa20.08■□□□□ 0.8
MAP1LC3B-206ENST00000564844 RGRP47804 291 aa20.08■□□□□ 0.8
MAP1LC3B-206ENST00000564844 CRISP3P54108 245 aa20.08■□□□□ 0.8
MAP1LC3B-206ENST00000564844 GABARAPL2P60520 117 aa20.08■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SLC35A2P78381 396 aa20.08■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ARTNQ5T4W7 220 aa20.08■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TMC5Q6UXY8 1006 aa20.08■□□□□ 0.8
MAP1LC3B-206ENST00000564844 USP43Q70EL4 1123 aa20.08■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TTC29Q8NA56 475 aaPredicted RBP20.08■□□□□ 0.8
MAP1LC3B-206ENST00000564844 Q96MT0 163 aa20.08■□□□□ 0.8
MAP1LC3B-206ENST00000564844 EGFL8Q99944 293 aa20.08■□□□□ 0.8
MAP1LC3B-206ENST00000564844 KIF17Q9P2E2 1029 aa20.08■□□□□ 0.8
MAP1LC3B-206ENST00000564844 PTCH2Q9Y6C5 1203 aa20.08■□□□□ 0.8
MAP1LC3B-206ENST00000564844 BRCA1P38398 1863 aaKnown RBP20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 AIREO43918 545 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 PGRP06401 933 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 KRT20P35900 424 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 CASP9P55211 416 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 IL2P60568 153 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TSPEARQ8WU66 669 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ZBTB18Q99592 522 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 FBXO8Q9NRD0 319 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SNX6Q9UNH7 406 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ARL5CA6NH57 179 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 RAMP2O60895 175 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 HOXD8P13378 290 aaPredicted RBP20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 MZF1P28698 734 aaPredicted RBP20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 AQP1P29972 269 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 FCGRTP55899 365 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 CREMQ03060 361 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 MS4A13Q5J8X5 152 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 MBOAT1Q6ZNC8 495 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 GOLGA7Q7Z5G4 137 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 LPCAT1Q8NF37 534 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 PJA1Q8NG27 643 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 CHCHD6Q9BRQ6 235 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ZYG11BQ9C0D3 744 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 KAT8Q9H7Z6 458 aaKnown RBP20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ERVK13-1Q9NX77 482 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 OPTCQ9UBM4 332 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 UGT2A1Q9Y4X1 527 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ANGPTL3Q9Y5C1 460 aa20.07■□□□□ 0.8
MAP1LC3B-206ENST00000564844 NBNO60934 754 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SH3BGRLO75368 114 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 HPRP00739 348 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SLC14A1Q13336 389 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TOP3AQ13472 1001 aaPredicted RBP20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 MSANTD2Q6P1R3 559 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 DPP10Q8N608 796 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 KLHDC9Q8NEP7 349 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 MDGA1Q8NFP4 955 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 OR7D4Q8NG98 312 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 BRSK1Q8TDC3 778 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 NECTIN3Q9NQS3 549 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ZNF236Q9UL36 1845 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ANKRD34BA5PLL1 514 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TAF4O00268 1085 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 GRK5P34947 590 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 BRMS1LQ5PSV4 323 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 SPATA2LQ8IUW3 424 aaPredicted RBP20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 KCNS3Q9BQ31 491 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 TFECO14948 347 aaPredicted RBP20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 ANKRD28O15084 1053 aa20.06■□□□□ 0.8
MAP1LC3B-206ENST00000564844 NUAK1O60285 661 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms