RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 SRPK3Q9UPE1 567 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 PTRH2Q9Y3E5 179 aaKnown RBP13.62□□□□□ -0.23
CDR2-204ENST00000564542 CREBBPQ92793 2442 aa13.62□□□□□ -0.23
CDR2-204ENST00000564542 SEC16AO15027 2179 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 ANKUB1A6NFN9 424 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 ZSCAN9O15535 394 aaPredicted RBP13.61□□□□□ -0.23
CDR2-204ENST00000564542 STK10O94804 968 aaKnown RBP13.61□□□□□ -0.23
CDR2-204ENST00000564542 UGT2B7P16662 529 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 GABRA4P48169 554 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 CDKN1CP49918 316 aaPredicted RBP13.61□□□□□ -0.23
CDR2-204ENST00000564542 SOX8P57073 446 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 DCDP81605 110 aaKnown RBP13.61□□□□□ -0.23
CDR2-204ENST00000564542 ELOAQ14241 798 aaKnown RBP13.61□□□□□ -0.23
CDR2-204ENST00000564542 DEFB110Q30KQ9 67 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 CRB2Q5IJ48 1285 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 C1orf189Q5VU69 101 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 DENND5AQ6IQ26 1287 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 TRIM73Q86UV7 250 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 SERPINA9Q86WD7 417 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 CDKL3Q8IVW4 592 aaPredicted RBP13.61□□□□□ -0.23
CDR2-204ENST00000564542 VSTM4Q8IW00 320 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 ACTL9Q8TC94 416 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 INPP5DQ92835 1189 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 TBL1YQ9BQ87 522 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 AP1M1Q9BXS5 423 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 ZNF552Q9H707 407 aaPredicted RBP13.61□□□□□ -0.23
CDR2-204ENST00000564542 ARNT2Q9HBZ2 717 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 P4HTMQ9NXG6 502 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 IFT80Q9P2H3 777 aaPredicted RBP13.61□□□□□ -0.23
CDR2-204ENST00000564542 PCDHGA10Q9Y5H3 936 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 ABCA12Q86UK0 2595 aa13.61□□□□□ -0.23
CDR2-204ENST00000564542 MACROD2A1Z1Q3 448 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 H7C0S8 307 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 LIN7AO14910 233 aaPredicted RBP13.6□□□□□ -0.23
CDR2-204ENST00000564542 HCRTR1O43613 425 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 AP2A2O94973 939 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 CHRM5P08912 532 aaPredicted RBP13.6□□□□□ -0.23
CDR2-204ENST00000564542 COPS2P61201 443 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 OTUD4Q01804 1114 aaKnown RBP13.6□□□□□ -0.23
CDR2-204ENST00000564542 ZIC1Q15915 447 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 CCDC181Q5TID7 509 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 C11orf63Q6NUN7 778 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 MRPL14Q6P1L8 145 aaKnown RBP13.6□□□□□ -0.23
CDR2-204ENST00000564542 TLDC1Q6P9B6 456 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 UNC5AQ6ZN44 842 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 Q6ZS92 163 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 PPP1R32Q7Z5V6 425 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 TICAM1Q8IUC6 712 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 CNGA4Q8IV77 575 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 ZADH2Q8N4Q0 377 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 CLDN19Q8N6F1 224 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 OR5AR1Q8NGP9 310 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 FLVCR1-AS1Q8TAF5 88 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 UBE2Q2Q8WVN8 375 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 KRT35Q92764 455 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 PTERQ96BW5 349 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 LRRC45Q96CN5 670 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 DNAJC1Q96KC8 554 aaKnown RBP13.6□□□□□ -0.23
CDR2-204ENST00000564542 SPATA13Q96N96 652 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 OR2A14Q96R47 310 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 RANBP9Q96S59 729 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 SPRTNQ9H040 489 aaPredicted RBP13.6□□□□□ -0.23
CDR2-204ENST00000564542 TXLNGQ9NUQ3 528 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 OR6C2Q9NZP2 312 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 DHCR7Q9UBM7 475 aaKnown RBP13.6□□□□□ -0.23
CDR2-204ENST00000564542 CDYLQ9Y232 598 aa13.6□□□□□ -0.23
CDR2-204ENST00000564542 COPG1Q9Y678 874 aaKnown RBP13.6□□□□□ -0.23
CDR2-204ENST00000564542 A0A0J9YY10 115 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 KCNN4O15554 427 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 CNOT3O75175 753 aaKnown RBP13.59□□□□□ -0.23
CDR2-204ENST00000564542 UMODP07911 640 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 SLC9A5Q14940 896 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 CYP2A13Q16696 494 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 NKAIN1Q4KMZ8 207 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 TAS2R42Q7RTR8 314 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 CUZD1Q86UP6 607 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 KLHDC8BQ8IXV7 354 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 ZNF655Q8N720 491 aaPredicted RBP13.59□□□□□ -0.23
CDR2-204ENST00000564542 TTC13Q8NBP0 860 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 CCDC110Q8TBZ0 833 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 NLE1Q9NVX2 485 aaPredicted RBP13.59□□□□□ -0.23
CDR2-204ENST00000564542 SPHK1Q9NYA1 384 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 POLG2Q9UHN1 485 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 ASF1AQ9Y294 204 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 EFR3BQ9Y2G0 817 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 NTNG1Q9Y2I2 539 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 CACNA1DQ01668 2161 aa13.59□□□□□ -0.23
CDR2-204ENST00000564542 CCDC88CQ9P219 2028 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 AGPSO00116 658 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 PJA2O43164 708 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 CTSBP07858 339 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 PRSS56P0CW18 603 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 RBP3P10745 1247 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 CTNNA2P26232 953 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 ACADLP28330 430 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 CTNNA1P35221 906 aaKnown RBP13.58□□□□□ -0.24
CDR2-204ENST00000564542 PTPN7P35236 360 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 NSG1P42857 185 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 MAGEA1P43355 309 aa13.58□□□□□ -0.24
CDR2-204ENST00000564542 FOXL2P58012 376 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms