RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 PSRC1Q6PGN9 363 aaPredicted RBP4.19□□□□□ -1.74
UBR1-205ENST00000564540 C4orf50Q6ZRC1 276 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 TMPRSS11FQ6ZWK6 438 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 COMMD2Q86X83 199 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 CEP57Q86XR8 500 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 TMEM139Q8IV31 216 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 ZNF440Q8IYI8 595 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 CFAP206Q8IYR0 622 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 ARHGAP24Q8N264 748 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 POC5Q8NA72 575 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 PPFIBP2Q8ND30 876 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 PAPD5Q8NDF8 572 aaKnown RBP4.19□□□□□ -1.74
UBR1-205ENST00000564540 SUSD6Q92537 303 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 TIGD1Q96MW7 591 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 NEK1Q96PY6 1258 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 FNBP1Q96RU3 617 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 IWS1Q96ST2 819 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 OLFM1Q99784 485 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 BTBD10Q9BSF8 475 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 MCRIP2Q9BUT9 160 aaKnown RBP4.19□□□□□ -1.74
UBR1-205ENST00000564540 KIFC3Q9BVG8 833 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 CHMP4AQ9BY43 222 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 P2RY12Q9H244 342 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 ZNF701Q9NV72 531 aaPredicted RBP4.19□□□□□ -1.74
UBR1-205ENST00000564540 RNF186Q9NXI6 227 aa4.19□□□□□ -1.74
UBR1-205ENST00000564540 ZNF644Q9H582 1327 aaPredicted RBP4.19□□□□□ -1.74
UBR1-205ENST00000564540 ANKUB1A6NFN9 424 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 PRAMEF11O60813 436 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 AVILO75366 819 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 MED24O75448 989 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 WDPCPO95876 746 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 PSMC6P62333 389 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 SLC1A5Q15758 541 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 FAM205BPQ63HN1 556 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 ADIPOR2Q86V24 386 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 AFAP1Q8N556 730 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 DCLK2Q8N568 766 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 MOSPD2Q8NHP6 518 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 IRGQQ8WZA9 623 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 MAGED4Q96JG8 741 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 EGFL8Q99944 293 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 SYT15Q9BQS2 421 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 CABLES2Q9BTV7 478 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 ATP13A3Q9H7F0 1226 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 B3GAT1Q9P2W7 334 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 CACNG4Q9UBN1 327 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 TP53BP1Q12888 1972 aaPredicted RBP4.18□□□□□ -1.74
UBR1-205ENST00000564540 ZNF541Q9H0D2 1346 aa4.18□□□□□ -1.74
UBR1-205ENST00000564540 DUS4LO95620 317 aaKnown RBP4.17□□□□□ -1.74
UBR1-205ENST00000564540 BCL10O95999 233 aa4.17□□□□□ -1.74
UBR1-205ENST00000564540 SLC6A6P31641 620 aa4.17□□□□□ -1.74
UBR1-205ENST00000564540 NR1D2Q14995 579 aa4.17□□□□□ -1.74
UBR1-205ENST00000564540 ITPRIPL2Q3MIP1 535 aa4.17□□□□□ -1.74
UBR1-205ENST00000564540 KRT79Q5XKE5 535 aa4.17□□□□□ -1.74
UBR1-205ENST00000564540 DHRS7BQ6IAN0 325 aaPredicted RBP4.17□□□□□ -1.74
UBR1-205ENST00000564540 PTPMT1Q8WUK0 201 aaPredicted RBP4.17□□□□□ -1.74
UBR1-205ENST00000564540 TREX2Q9BQ50 279 aaPredicted RBP4.17□□□□□ -1.74
UBR1-205ENST00000564540 SDF4Q9BRK5 362 aa4.17□□□□□ -1.74
UBR1-205ENST00000564540 NUP85Q9BW27 656 aa4.17□□□□□ -1.74
UBR1-205ENST00000564540 KRTAP4-3Q9BYR4 195 aa4.17□□□□□ -1.74
UBR1-205ENST00000564540 OSGEPL1Q9H4B0 414 aa4.17□□□□□ -1.74
UBR1-205ENST00000564540 ADD3Q9UEY8 706 aaKnown RBP4.17□□□□□ -1.74
UBR1-205ENST00000564540 TBC1D29Q9UFV1 150 aa4.17□□□□□ -1.74
UBR1-205ENST00000564540 DAPK2Q9UIK4 370 aa4.17□□□□□ -1.74
UBR1-205ENST00000564540 GRIP1Q9Y3R0 1128 aa4.17□□□□□ -1.74
UBR1-205ENST00000564540 A0A1B0GVY2 172 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 FEZF1A0PJY2 475 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 MSGN1A6NI15 193 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 KLF11O14901 512 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 DCXO43602 365 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 KHDRBS3O75525 346 aaKnown RBP4.16□□□□□ -1.74
UBR1-205ENST00000564540 CLDN1O95832 211 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 GJA1P17302 382 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 SP100P23497 879 aaPredicted RBP4.16□□□□□ -1.74
UBR1-205ENST00000564540 LMO4P61968 165 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 IL27RAQ6UWB1 636 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 LACC1Q8IV20 430 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 LINC00346Q8IVM7 164 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 RAB42Q8N4Z0 105 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 NPEPL1Q8NDH3 523 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 OR11H4Q8NGC9 324 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 DYRK2Q92630 601 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 CLEC7AQ9BXN2 247 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 MMP27Q9H306 513 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 PSD3Q9NYI0 1048 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 VPS28Q9UK41 221 aa4.16□□□□□ -1.74
UBR1-205ENST00000564540 COL2A1P02458 1487 aaPredicted RBP4.16□□□□□ -1.74
UBR1-205ENST00000564540 RSF1Q96T23 1441 aaPredicted RBP4.15□□□□□ -1.74
UBR1-205ENST00000564540 IGLV7-46A0A075B6I9 117 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 LOC102723996A0A087X1L8 192 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 ZNF195O14628 629 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 RNASEH1O60930 286 aaKnown RBP4.15□□□□□ -1.75
UBR1-205ENST00000564540 OR2T7P0C7T2 308 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 CSH1P0DML2 217 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 CSH2P0DML3 217 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 CA6P23280 308 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 DNASE1P24855 282 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 GRAPQ13588 217 aa4.15□□□□□ -1.75
UBR1-205ENST00000564540 SIM2Q14190 667 aaPredicted RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms