RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 ACSS2Q9NR19 701 aa17.34■□□□□ 0.37
GDE1-203ENST00000564172 DOLKQ9UPQ8 538 aa17.34■□□□□ 0.37
GDE1-203ENST00000564172 CEPT1Q9Y6K0 416 aa17.34■□□□□ 0.37
GDE1-203ENST00000564172 CFAP99D6REC4 459 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 IDH3BO43837 385 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 PEX1O43933 1283 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 RNASEH2AO75792 299 aaKnown RBP17.33■□□□□ 0.37
GDE1-203ENST00000564172 FUCA1P04066 466 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 MTHFD2P13995 350 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 IL9P15248 144 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 ENPP1P22413 925 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 CDK9P50750 372 aaKnown RBP17.33■□□□□ 0.37
GDE1-203ENST00000564172 DPTQ07507 201 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 ZNF829Q3KNS6 432 aaPredicted RBP17.33■□□□□ 0.37
GDE1-203ENST00000564172 MMEL1Q495T6 779 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 FBXO43Q4G163 708 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 LDLRAP1Q5SW96 308 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 NLRP8Q86W28 1048 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 ZBTB2Q8N680 514 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 RFWD2Q8NHY2 731 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 CYP4F12Q9HCS2 524 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 FBXL12Q9NXK8 326 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 C6orf203Q9P0P8 240 aaPredicted RBP17.33■□□□□ 0.37
GDE1-203ENST00000564172 DCTN4Q9UJW0 460 aa17.33■□□□□ 0.37
GDE1-203ENST00000564172 CNOT6Q9ULM6 557 aaKnown RBP17.33■□□□□ 0.37
GDE1-203ENST00000564172 C15orf38-AP3S2A0A0A6YYH1 394 aa17.33■□□□□ 0.36
GDE1-203ENST00000564172 K7ESM1 405 aa17.33■□□□□ 0.36
GDE1-203ENST00000564172 BTN3A1O00481 513 aa17.33■□□□□ 0.36
GDE1-203ENST00000564172 KERAO60938 352 aa17.33■□□□□ 0.36
GDE1-203ENST00000564172 PCDH8O95206 1070 aa17.33■□□□□ 0.36
GDE1-203ENST00000564172 MSH3P20585 1137 aa17.33■□□□□ 0.36
GDE1-203ENST00000564172 ACTR3P61158 418 aa17.33■□□□□ 0.36
GDE1-203ENST00000564172 ZNF648Q5T619 568 aaPredicted RBP17.33■□□□□ 0.36
GDE1-203ENST00000564172 ARPINQ7Z6K5 226 aa17.33■□□□□ 0.36
GDE1-203ENST00000564172 SLC22A9Q8IVM8 553 aa17.33■□□□□ 0.36
GDE1-203ENST00000564172 PHF21BQ96EK2 531 aa17.33■□□□□ 0.36
GDE1-203ENST00000564172 RSL24D1Q9UHA3 163 aaKnown RBP17.33■□□□□ 0.36
GDE1-203ENST00000564172 ERVK-11Q9UQG0 969 aa17.33■□□□□ 0.36
GDE1-203ENST00000564172 IFT52Q9Y366 437 aa17.33■□□□□ 0.36
GDE1-203ENST00000564172 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.33■□□□□ 0.36
GDE1-203ENST00000564172 PIKFYVEQ9Y2I7 2098 aa17.33■□□□□ 0.36
GDE1-203ENST00000564172 INPP4BO15327 924 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 SGTAO43765 313 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 DNTTP04053 509 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 ESRRAP11474 423 aaPredicted RBP17.32■□□□□ 0.36
GDE1-203ENST00000564172 DGKAP23743 735 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 RPLP0P6Q8NHW5 317 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 PIWIL2Q8TC59 973 aaKnown RBP17.32■□□□□ 0.36
GDE1-203ENST00000564172 PPP4R1Q8TF05 950 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 FUBP1Q96AE4 644 aaKnown RBP17.32■□□□□ 0.36
GDE1-203ENST00000564172 FAM131CQ96AQ9 280 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 EHD1Q9H4M9 534 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 KCNK13Q9HB14 408 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 NCKIPSDQ9NZQ3 722 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 KLHL42Q9P2K6 505 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 MARCOQ9UEW3 520 aaPredicted RBP17.32■□□□□ 0.36
GDE1-203ENST00000564172 RNF112Q9ULX5 631 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 DNAJC16Q9Y2G8 782 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 LRRK1Q38SD2 2015 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 NPEPPSL1A6NEC2 478 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 IGLON5A6NGN9 336 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 CENPBD1B2RD01 187 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 LOC730098B7Z3J9 87 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 UBXN8O00124 270 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 TM7SF2O76062 418 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 KITP10721 976 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 CCR7P32248 378 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 GPR1P46091 355 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 RGS4P49798 205 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 ENTPD1P49961 510 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 TFF2Q03403 129 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 RAET1GQ6H3X3 334 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 PIWIL4Q7Z3Z4 852 aaKnown RBP17.32■□□□□ 0.36
GDE1-203ENST00000564172 CCNYL1Q8N7R7 359 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 EXT2Q93063 718 aa17.32■□□□□ 0.36
GDE1-203ENST00000564172 AP2A2O94973 939 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 HSPA4LO95757 839 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 NFKB2Q00653 900 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 TMEM115Q12893 351 aaPredicted RBP17.31■□□□□ 0.36
GDE1-203ENST00000564172 PHYKPLQ8IUZ5 450 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 GANCQ8TET4 914 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 KCTD5Q9NXV2 234 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 TAS2R1Q9NYW7 299 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 A0A0G2JND7 137 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 AQP9O43315 295 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 TNFAIP8O95379 198 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 CHRNGP07510 517 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 IMPDH1P20839 514 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 PRKACBP22694 351 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 PGM1P36871 562 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 CCR10P46092 362 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 HNRNPFP52597 415 aaKnown RBP17.31■□□□□ 0.36
GDE1-203ENST00000564172 APOFQ13790 326 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 CRY1Q16526 586 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 TTLL9Q3SXZ7 439 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 HSF5Q4G112 596 aaPredicted RBP17.31■□□□□ 0.36
GDE1-203ENST00000564172 ARL13AQ5H913 290 aaPredicted RBP17.31■□□□□ 0.36
GDE1-203ENST00000564172 EOGTQ5NDL2 527 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 FAM91A1Q658Y4 838 aa17.31■□□□□ 0.36
GDE1-203ENST00000564172 TMEM92Q6UXU6 159 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms