RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 STK17BO94768 372 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 MT-ND3P03897 115 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 IVDP26440 423 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 PRDX3P30048 256 aaKnown RBP12.99□□□□□ -0.33
CLK3-213ENST00000563842 ATP5DP30049 168 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 KPNA2P52292 529 aaKnown RBP12.99□□□□□ -0.33
CLK3-213ENST00000563842 ARL4CP56559 192 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 PPP1CAP62136 330 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 SH3BP2P78314 561 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 DHX9Q08211 1270 aaKnown RBP12.99□□□□□ -0.33
CLK3-213ENST00000563842 ABRQ12979 859 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 TUBB3Q13509 450 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 MAP7Q14244 749 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 TGIF1Q15583 401 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 TTLL9Q3SXZ7 439 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 BBS9Q3SYG4 887 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.99□□□□□ -0.33
CLK3-213ENST00000563842 ARHGAP40Q5TG30 622 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 SYT10Q6XYQ8 523 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 CENPUQ71F23 418 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 DCUN1D3Q8IWE4 304 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 CACNA2D3Q8IZS8 1091 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 D2HGDHQ8N465 521 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 RAB42Q8N4Z0 105 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 OR8K5Q8NH50 307 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 CFAP61Q8NHU2 1237 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 LKAAEAR1Q8TD35 194 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 SNRNP27Q8WVK2 155 aaKnown RBP12.99□□□□□ -0.33
CLK3-213ENST00000563842 SKA2Q8WVK7 121 aaPredicted RBP12.99□□□□□ -0.33
CLK3-213ENST00000563842 NKD1Q969G9 470 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 PMEPA1Q969W9 287 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 KIAA1143Q96AT1 154 aaPredicted RBP12.99□□□□□ -0.33
CLK3-213ENST00000563842 KRT12Q99456 494 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 FANCEQ9HB96 536 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 CPNE5Q9HCH3 593 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 LATS2Q9NRM7 1088 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 ACTR10Q9NZ32 417 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 PILRAQ9UKJ1 303 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 BTRCQ9Y297 605 aa12.99□□□□□ -0.33
CLK3-213ENST00000563842 NAV2Q8IVL1 2488 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 FAM187AA6NFU0 413 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 BTN3A3O00478 584 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 SEC31AO94979 1220 aaKnown RBP12.98□□□□□ -0.33
CLK3-213ENST00000563842 S1PR4O95977 384 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 CCNFP41002 786 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 RAB28P51157 221 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 ITGA8P53708 1063 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 RHDQ02161 417 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 ABHD18Q0P651 414 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 CRYMQ14894 314 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 KIR2DS3Q14952 304 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 HIF1AQ16665 826 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 KYNUQ16719 465 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 CTSL3PQ5NE16 218 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 HIBCHQ6NVY1 386 aaPredicted RBP12.98□□□□□ -0.33
CLK3-213ENST00000563842 UNC5AQ6ZN44 842 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 KCNMB4Q86W47 210 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 VRK3Q8IV63 474 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 ADGRF3Q8IZF5 1079 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 ESX1Q8N693 406 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 SPATA4Q8NEY3 305 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 RAD51AP1Q96B01 352 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 SLC22A18Q96BI1 424 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 CRELD1Q96HD1 420 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 UBL7Q96S82 380 aaPredicted RBP12.98□□□□□ -0.33
CLK3-213ENST00000563842 TRIM56Q9BRZ2 755 aaKnown RBP12.98□□□□□ -0.33
CLK3-213ENST00000563842 TRIM51Q9BSJ1 452 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 RAB11FIP5Q9BXF6 653 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 ULBP3Q9BZM4 244 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 SPRY4Q9C004 299 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 XKR8Q9H6D3 395 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 FGF21Q9NSA1 209 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 KLHL42Q9P2K6 505 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 FBXO5Q9UKT4 447 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 SLC39A10Q9ULF5 831 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 ICKQ9UPZ9 632 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 ITPR1Q14643 2758 aa12.98□□□□□ -0.33
CLK3-213ENST00000563842 HEATR5BQ9P2D3 2071 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 FANCGO15287 622 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 NIPSNAP2O75323 286 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 SPAG6O75602 509 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 CHRM5P08912 532 aaPredicted RBP12.97□□□□□ -0.33
CLK3-213ENST00000563842 CCNYL3P0C7X3 344 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 MSL3P1P0C860 447 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 FOLR1P15328 257 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 SLC1A2P43004 574 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 TUBB4BP68371 445 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 CALCOCO2Q13137 446 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 CTBP1Q13363 440 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 TUBB2AQ13885 445 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 HSP90AA5PQ58FG0 334 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 UGT3A1Q6NUS8 523 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 SPESP1Q6UW49 350 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 DENND6AQ8IWF6 608 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 AGGF1Q8N302 714 aaeCLIP12.97□□□□□ -0.33
CLK3-213ENST00000563842 C17orf53Q8N3J3 647 aaPredicted RBP12.97□□□□□ -0.33
CLK3-213ENST00000563842 ZBTB2Q8N680 514 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 LSM14AQ8ND56 463 aaKnown RBP12.97□□□□□ -0.33
CLK3-213ENST00000563842 TUBB2BQ9BVA1 445 aa12.97□□□□□ -0.33
CLK3-213ENST00000563842 PITPNM3Q9BZ71 974 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms