RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 CUL4AQ13619 759 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 SLC39A14Q15043 492 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 STILQ15468 1287 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 HSPB2Q16082 182 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 MAPKAPK3Q16644 382 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 ACER2Q5QJU3 275 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 TLDC1Q6P9B6 456 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 CCDC73Q6ZRK6 1079 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 NELFCDQ8IXH7 590 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 ZNF655Q8N720 491 aaPredicted RBP10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 HORMAD2Q8N7B1 307 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 PAF1Q8N7H5 531 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 OR5M9Q8NGP3 310 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 REPS1Q96D71 796 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 INTS4Q96HW7 963 aaKnown RBP10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 TNFRSF13CQ96RJ3 184 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 USP28Q96RU2 1077 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 PITPNM3Q9BZ71 974 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 RBSNQ9H1K0 784 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 ANKRD10Q9NXR5 420 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 DNAI1Q9UI46 699 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 SMC3Q9UQE7 1217 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 MED12LQ86YW9 2145 aa10.07□□□□□ -0.8
HDGFL3-204ENST00000563790 CASKO14936 926 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 RAMP2O60895 175 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 SUN1O94901 812 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 GLI1P08151 1106 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 ICAM2P13598 275 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 ZNF16P17020 682 aaPredicted RBP10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 KRT9P35527 623 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 GCLMP48507 274 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 DRG2P55039 364 aaKnown RBP10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 VSX2P58304 361 aaPredicted RBP10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 BCL2L1Q07817 233 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 KLC1Q07866 573 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 INSCQ1MX18 579 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 GARNL3Q5VVW2 1013 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 SRLQ86TD4 932 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 NLRP14Q86W24 1093 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 PDILTQ8N807 584 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 FAM216AQ8WUB2 273 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 TMEM174Q8WUU8 243 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 N4BP2L2Q92802 583 aaPredicted RBP10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 ZNF354BQ96LW1 612 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 PLCD4Q9BRC7 762 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 TIMM29Q9BSF4 260 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 KLC2Q9H0B6 622 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 DEF6Q9H4E7 631 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 DMAC2Q9NW81 257 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 WDR37Q9Y2I8 494 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 NINQ8N4C6 2090 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 PLXNB1O43157 2135 aa10.06□□□□□ -0.8
HDGFL3-204ENST00000563790 OR14I1A6ND48 311 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 NPIPB15A6NHN6 443 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 DEFB108AA8MXU0 73 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 E5RJQ4 531 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 BCKDKO14874 412 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 HCRTR1O43613 425 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 PDE9AO76083 593 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 SERPINC1P01008 464 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 PAEPP09466 180 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 ZNF7P17097 686 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 ZNF8P17098 575 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 UGT1A1P22309 533 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 CASP1P29466 404 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 ACVR1BP36896 505 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 GPD2P43304 727 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 RGRP47804 291 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 GCGRP47871 477 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 COL10A1Q03692 680 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 PPP3CAQ08209 521 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 GALNT3Q14435 633 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 CYB5R2Q6BCY4 276 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 POMZP3Q6PJE2 187 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 NLRP9Q7RTR0 991 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 ADGRG6Q86SQ4 1221 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 C16orf52Q8NHV5 167 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 STK32AQ8WU08 396 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 SEMA4DQ92854 862 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 C7orf25Q9BPX7 421 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 SLCO5A1Q9H2Y9 848 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 ZFYVE1Q9HBF4 777 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 TMEM248Q9NWD8 314 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 PLA2G2EQ9NZK7 142 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 C6orf203Q9P0P8 240 aaPredicted RBP10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 ATXN10Q9UBB4 475 aa10.05□□□□□ -0.8
HDGFL3-204ENST00000563790 NCKAP5O14513 1909 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 A0A1B0GX78 115 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 MATN2O00339 956 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 HSF2BPO75031 334 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 WDR1O75083 606 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 CCDC166P0CW27 439 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 CYP2A6P11509 494 aaPredicted RBP10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 POLR2CP19387 275 aaPredicted RBP10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 CYLC1P35663 651 aaPredicted RBP10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 HALP42357 657 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 GABRA4P48169 554 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 NR0B1P51843 470 aaKnown RBP10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 EFNA3P52797 238 aa10.04□□□□□ -0.8
HDGFL3-204ENST00000563790 FASTKQ14296 549 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms