RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 NUDT4Q9NZJ9 180 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 KLHL3Q9UH77 587 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 ST14Q9Y5Y6 855 aa10.26□□□□□ -0.77
RNF40-204ENST00000563683 COCHO43405 550 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 KRT75O95678 551 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 G6PDP11413 515 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 IDH2P48735 452 aaKnown RBP10.25□□□□□ -0.77
RNF40-204ENST00000563683 CSRP3P50461 194 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 FOXM1Q08050 763 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 CD300CQ08708 224 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 GALNT1Q10472 559 aaPredicted RBP10.25□□□□□ -0.77
RNF40-204ENST00000563683 LDLRAP1Q5SW96 308 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 C6orf183Q5T699 404 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 CYP20A1Q6UW02 462 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 THAP5Q7Z6K1 395 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 MRPL10Q7Z7H8 261 aaKnown RBP10.25□□□□□ -0.77
RNF40-204ENST00000563683 OR4F6Q8NGB9 312 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 CAPNS2Q96L46 248 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 RBMX2Q9Y388 322 aaKnown RBP10.25□□□□□ -0.77
RNF40-204ENST00000563683 ELOVL7A1L3X0 281 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 I6L893 689 aaPredicted RBP10.25□□□□□ -0.77
RNF40-204ENST00000563683 NOBOXO60393 691 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 CAPN15O75808 1086 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 OAZ2O95190 189 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 CXCL14O95715 111 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 SNAP29O95721 258 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 GALTP07902 379 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 ATP6V1E1P36543 226 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 FOXA1P55317 472 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 SEMA3BQ13214 749 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 TOP3AQ13472 1001 aaPredicted RBP10.25□□□□□ -0.77
RNF40-204ENST00000563683 DGUOKQ16854 277 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 CLLU1OSQ5K130 101 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 KDELC1Q6UW63 502 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 SLC47A1Q96FL8 570 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 VMP1Q96GC9 406 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 BCL7BQ9BQE9 202 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 EBPLQ9BY08 206 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 MTIF3Q9H2K0 278 aaKnown RBP10.25□□□□□ -0.77
RNF40-204ENST00000563683 SOX17Q9H6I2 414 aaPredicted RBP10.25□□□□□ -0.77
RNF40-204ENST00000563683 BRD9Q9H8M2 597 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 RNF186Q9NXI6 227 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 MTRRQ9UBK8 725 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 SIP14410 1827 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 SSC5DA1L4H1 1573 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 A0A1W2PP18 115 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 FAM20BO75063 409 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 CLDN9O95484 217 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 GPC1P35052 558 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 SLC26A3P40879 764 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 PLA2G16P53816 162 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 CHRNA6Q15825 494 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 XKR4Q5GH76 650 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 PLEKHG7Q6ZR37 379 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 OTOP2Q7RTS6 562 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 BNIPLQ7Z465 357 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 SLCO6A1Q86UG4 719 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 OR52B6Q8NGF0 335 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 PLD4Q96BZ4 506 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 HERC2P3Q9BVR0 1158 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 DERL2Q9GZP9 239 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 REEP1Q9H902 201 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 SACM1LQ9NTJ5 587 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 WDR70Q9NW82 654 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 YIPF1Q9Y548 306 aa10.25□□□□□ -0.77
RNF40-204ENST00000563683 TRIP11Q15643 1979 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 ARVCFO00192 962 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 GPR39O43194 453 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 MAN1A2O60476 641 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 BCAS1O75363 584 aaPredicted RBP10.24□□□□□ -0.77
RNF40-204ENST00000563683 CYBAP13498 195 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 MAGEA11P43364 429 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 ARCN1P48444 511 aaKnown RBP10.24□□□□□ -0.77
RNF40-204ENST00000563683 TPTEP56180 551 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 EPS8Q12929 822 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 GTF2IRD2BQ6EKJ0 949 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 GTF2IRD2Q86UP8 949 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 C2orf73Q8N5S3 287 aaPredicted RBP10.24□□□□□ -0.77
RNF40-204ENST00000563683 OR13J1Q8NGT2 312 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 SLC13A3Q8WWT9 602 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 LRRC3Q9BY71 257 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 ABCB8Q9NUT2 735 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 KCTD5Q9NXV2 234 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 SRRDQ9UH36 339 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 SPO11Q9Y5K1 396 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 NRXN2Q9P2S2 1712 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 SDK1Q7Z5N4 2213 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 A0A1W2PRU2 124 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 HHLA1C9JL84 531 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 AREL1O15033 823 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 HNF4AP41235 474 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 AP1S1P61966 158 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 NAE1Q13564 534 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 TCEA2Q15560 299 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 ERAP2Q6P179 960 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 YAF2Q8IY57 180 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 HDAC2Q92769 488 aaKnown RBP10.24□□□□□ -0.77
RNF40-204ENST00000563683 MUS81Q96NY9 551 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 RTP3Q9BQQ7 232 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 NUSAP1Q9BXS6 441 aaKnown RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms