RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 GCAP28676 217 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 ETV6P41212 452 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 MEP1AQ16819 746 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 TATDN3Q17R31 274 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 CGB2Q6NT52 195 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 RETSATQ6NUM9 610 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 LYSMD2Q8IV50 215 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 AGBL3Q8NEM8 1001 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 DCPSQ96C86 337 aaKnown RBP6.16□□□□□ -1.42
CLK3-212ENST00000563418 RANGRFQ9HD47 186 aaPredicted RBP6.16□□□□□ -1.42
CLK3-212ENST00000563418 LYARQ9NX58 379 aaKnown RBP6.16□□□□□ -1.42
CLK3-212ENST00000563418 ABI2Q9NYB9 513 aaPredicted RBP6.16□□□□□ -1.42
CLK3-212ENST00000563418 NR2E1Q9Y466 385 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 SPATA31A6Q5VVP1 1343 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 TNFRSF11BO00300 401 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 TOR1AO14656 332 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 NOBOXO60393 691 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 FOXD2O60548 495 aaPredicted RBP6.16□□□□□ -1.42
CLK3-212ENST00000563418 DHRS4L1P0CG22 281 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 HOXA13P31271 388 aaPredicted RBP6.16□□□□□ -1.42
CLK3-212ENST00000563418 RNF4P78317 190 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 GK3PQ14409 553 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 RAP1GAP2Q684P5 730 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 KCNT2Q6UVM3 1135 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 DNAJC14Q6Y2X3 702 aaPredicted RBP6.16□□□□□ -1.42
CLK3-212ENST00000563418 DET1Q7L5Y6 550 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 TAS1R2Q8TE23 839 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 ZFPM2Q8WW38 1151 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 DNAJC19Q96DA6 116 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 CNTN6Q9UQ52 1028 aa6.16□□□□□ -1.42
CLK3-212ENST00000563418 OGTO15294 1046 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 AP2A1O95782 977 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 CA5AP35218 305 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 CDKN2BP42772 138 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 ARCN1P48444 511 aaKnown RBP6.15□□□□□ -1.42
CLK3-212ENST00000563418 TWF1Q12792 350 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 KEAP1Q14145 624 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 TRIM40Q6P9F5 258 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 ZNF438Q7Z4V0 828 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 NDNFQ8TB73 568 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 ZNF606Q8WXB4 792 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 GATA5Q9BWX5 397 aaPredicted RBP6.15□□□□□ -1.42
CLK3-212ENST00000563418 CHIAQ9BZP6 476 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 ARL6Q9H0F7 186 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 DCAF16Q9NXF7 216 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 NKIRAS2Q9NYR9 191 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 DNMT3LQ9UJW3 386 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 TRUB2O95900 331 aaKnown RBP6.15□□□□□ -1.42
CLK3-212ENST00000563418 PIGRP01833 764 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 BMP4P12644 408 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 DDX6P26196 483 aaKnown RBP eCLIP6.15□□□□□ -1.42
CLK3-212ENST00000563418 PAN3Q58A45 887 aaKnown RBP6.15□□□□□ -1.42
CLK3-212ENST00000563418 MACC1Q6ZN28 852 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 ZDHHC21Q8IVQ6 265 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 VGLL2Q8N8G2 317 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 ZNF615Q8N8J6 731 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 HEBP1Q9NRV9 189 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 FAM118AQ9NWS6 357 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 MOCS1Q9NZB8 636 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 PCDHA10Q9Y5I2 948 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 FPGTO14772 594 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 MIPP30301 263 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 RYKP34925 604 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 CTNNB1P35222 781 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 ZNF543Q08ER8 600 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 PWP1Q13610 501 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 ANXA8L1Q5VT79 327 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 PRSS42Q7Z5A4 293 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 MILR1Q7Z6M3 343 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 ZNF614Q8N883 585 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 SLC2A14Q8TDB8 520 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 ELMO3Q96BJ8 720 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 PWWP2AQ96N64 755 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 CNTNAP3BQ96NU0 1288 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 TREX2Q9BQ50 279 aaPredicted RBP6.15□□□□□ -1.42
CLK3-212ENST00000563418 INTS7Q9NVH2 962 aaKnown RBP6.15□□□□□ -1.42
CLK3-212ENST00000563418 PGAP2Q9UHJ9 254 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 MYOCOSA0A1B0GUC4 107 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 NAP1L6A6NFF2 107 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 XYLBO75191 536 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 MT-CO1P00395 513 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 PTBP1P26599 531 aaKnown RBP eCLIP6.15□□□□□ -1.42
CLK3-212ENST00000563418 RGS19P49795 217 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 MEOX2P50222 304 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 NR0B1P51843 470 aaKnown RBP6.15□□□□□ -1.42
CLK3-212ENST00000563418 SNRPD2P62316 118 aaKnown RBP6.15□□□□□ -1.42
CLK3-212ENST00000563418 COL13A1Q5TAT6 717 aaPredicted RBP6.15□□□□□ -1.42
CLK3-212ENST00000563418 LRRC69Q6ZNQ3 347 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 STK40Q8N2I9 435 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 MINDY1Q8N5J2 469 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 PTGR2Q8N8N7 351 aaPredicted RBP6.15□□□□□ -1.42
CLK3-212ENST00000563418 SLAIN1Q8ND83 568 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 OR52E6Q96RD3 313 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 INTS6Q9UL03 887 aaKnown RBP6.15□□□□□ -1.42
CLK3-212ENST00000563418 JAG2Q9Y219 1238 aa6.15□□□□□ -1.42
CLK3-212ENST00000563418 A0A087WZ62 844 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 FAM159BA6NKW6 160 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 UROSP10746 265 aa6.15□□□□□ -1.43
CLK3-212ENST00000563418 HNRNPLP14866 589 aaKnown RBP eCLIP6.15□□□□□ -1.43
CLK3-212ENST00000563418 PFKFB4Q16877 469 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms