RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 STC2O76061 302 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 MOCS3O95396 460 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 INHBBP09529 407 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 DLATP10515 647 aaKnown RBP5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 CLUP10909 449 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 MMP8P22894 467 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 KLRC2P26717 231 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 ACADLP28330 430 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 CORO1AP31146 461 aaKnown RBP5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 EEFSECP57772 596 aaKnown RBP5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 BPIFB4P59827 614 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 SHC2P98077 582 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 RESTQ13127 1097 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 RIN1Q13671 783 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 PTPRCAPQ14761 206 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 DRAP1Q14919 205 aaPredicted RBP5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 MAPK11Q15759 364 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 SMN1Q16637 294 aaKnown RBP5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 FAM214AQ32MH5 1076 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 CDONQ4KMG0 1287 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 TDRD12Q587J7 1177 aaKnown RBP5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 CCDC122Q5T0U0 273 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 PMF1Q6P1K2 205 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 CASC4Q6P4E1 433 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 METAP1DQ6UB28 335 aaPredicted RBP5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 PRSS45Q7RTY3 260 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 WDR49Q8IV35 697 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 REXO1L1PQ8IX06 675 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 AADATQ8N5Z0 425 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 ANKRD13CQ8N6S4 541 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 AMER2Q8N7J2 671 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 STEAP2Q8NFT2 490 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 MIPOL1Q8TD10 442 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 ZNF483Q8TF39 744 aaPredicted RBP5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 FIG4Q92562 907 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 AP2M1Q96CW1 435 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 SNRNP40Q96DI7 357 aaKnown RBP5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 C14orf79Q96F83 325 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 MARS2Q96GW9 593 aaKnown RBP5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 ZBED3Q96IU2 234 aaPredicted RBP5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 ZNF416Q9BWM5 594 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 CAPS2Q9BXY5 557 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 SPATC1LQ9H0A9 340 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 EPB41L5Q9HCM4 733 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 SLC24A2Q9UI40 661 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 TEKT2Q9UIF3 430 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 AGO2Q9UKV8 859 aaKnown RBP5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 AAR2Q9Y312 384 aaKnown RBP5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 REXO2Q9Y3B8 237 aaKnown RBP5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 PMF1-BGLAPU3KQ54 211 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 SPEF2Q9C093 1822 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 WDR90Q96KV7 1748 aa5.1□□□□□ -1.59
VPS35P1-201ENST00000563400 C15orf38-AP3S2A0A0A6YYH1 394 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 GOLGA8OA6NCC3 632 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 C3orf70A6NLC5 250 aaPredicted RBP5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 DBX1A6NMT0 343 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 ZNF716A6NP11 495 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 GOLGA8NF8WBI6 632 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 ATP2A1O14983 1001 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 CTDSPLO15194 276 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 OGG1O15527 345 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 HSF2BPO75031 334 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 ZNF254O75437 659 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 GCATO75600 419 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 CBX6O95503 412 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 TTLL1O95922 423 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 IL1BP01584 269 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 TFP02787 698 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 C8BP07358 591 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 ZNF735P0CB33 412 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 VSIG10L2P0DP72 767 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 UGT1A6P19224 532 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 DRD5P21918 477 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 PSMB4P28070 264 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 VIPR1P32241 457 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 MCM5P33992 734 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 RAP1GAPP47736 663 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 ARSEP51690 589 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 EIF3EP60228 445 aaKnown RBP5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 ACTR3P61158 418 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 PIGFQ07326 219 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 MRPL49Q13405 166 aaKnown RBP5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 BMT2Q1RMZ1 405 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 SMTNL2Q2TAL5 461 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 USP41Q3LFD5 358 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 PREPLQ4J6C6 727 aaPredicted RBP5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 Q5PR19 223 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 DHRS7BQ6IAN0 325 aaPredicted RBP5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 IL20RBQ6UXL0 311 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 RPTNQ6XPR3 784 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 PRR23BQ6ZRT6 265 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 RTN4RL2Q86UN3 420 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 NLRX1Q86UT6 975 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 LUZP1Q86V48 1076 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 GRAMD2AQ8IUY3 354 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 MAPKAPK5Q8IW41 473 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 AQP12AQ8IXF9 295 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 IZUMO1Q8IYV9 350 aa5.09□□□□□ -1.59
VPS35P1-201ENST00000563400 CERS5Q8N5B7 392 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms