RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 CHSY3Q70JA7 882 aa17.6■□□□□ 0.41
COMMD4-208ENST00000563220 DDIASQ8IXT1 998 aa17.6■□□□□ 0.41
COMMD4-208ENST00000563220 SPDYE1Q8NFV5 336 aaPredicted RBP17.6■□□□□ 0.41
COMMD4-208ENST00000563220 FBXL8Q96CD0 374 aa17.6■□□□□ 0.41
COMMD4-208ENST00000563220 FOPNLQ96NB1 174 aa17.6■□□□□ 0.41
COMMD4-208ENST00000563220 NUSAP1Q9BXS6 441 aaKnown RBP17.6■□□□□ 0.41
COMMD4-208ENST00000563220 LRMDAQ9H2I8 198 aa17.6■□□□□ 0.41
COMMD4-208ENST00000563220 DPEP2Q9H4A9 486 aa17.6■□□□□ 0.41
COMMD4-208ENST00000563220 AKTIPQ9H8T0 292 aa17.6■□□□□ 0.41
COMMD4-208ENST00000563220 ZNHIT2Q9UHR6 403 aa17.6■□□□□ 0.41
COMMD4-208ENST00000563220 PABPN1LA6NDY0 278 aaKnown RBP17.59■□□□□ 0.41
COMMD4-208ENST00000563220 CHURC1-FNTBB4DL54 471 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 CEACAM5P06731 702 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 CAPN1P07384 714 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 EPB42P16452 691 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 PTPN4P29074 926 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 ARL1P40616 181 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-208ENST00000563220 MNAT1P51948 309 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 DGKEP52429 567 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 ELF3P78545 371 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-208ENST00000563220 RIPK1Q13546 671 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 TTC23LQ6PF05 361 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 SCIMPQ6UWF3 145 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 RINLQ6ZS11 566 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 SYT13Q7L8C5 426 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 TRIM69Q86WT6 500 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 PGBD3Q8N328 593 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 OXR1Q8N573 874 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 OR2T34Q8NGX1 318 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 METTL6Q8TCB7 284 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 PKP4Q99569 1192 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 ZDHHC5Q9C0B5 715 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 OR52A5Q9H2C5 316 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 POLMQ9NP87 494 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-208ENST00000563220 USP36Q9P275 1121 aaKnown RBP17.59■□□□□ 0.41
COMMD4-208ENST00000563220 GIMAP2Q9UG22 337 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 COPG1Q9Y678 874 aaKnown RBP17.59■□□□□ 0.41
COMMD4-208ENST00000563220 DNMT3AQ9Y6K1 912 aaPredicted RBP17.59■□□□□ 0.41
COMMD4-208ENST00000563220 TRIOO75962 3097 aa17.59■□□□□ 0.41
COMMD4-208ENST00000563220 POM121BA6NF01 834 aa17.58■□□□□ 0.41
COMMD4-208ENST00000563220 KMOO15229 486 aa17.58■□□□□ 0.41
COMMD4-208ENST00000563220 RASSF2P50749 326 aa17.58■□□□□ 0.41
COMMD4-208ENST00000563220 CLDN2P57739 230 aa17.58■□□□□ 0.41
COMMD4-208ENST00000563220 NAA25Q14CX7 972 aa17.58■□□□□ 0.41
COMMD4-208ENST00000563220 LRRC70Q7Z2Q7 622 aa17.58■□□□□ 0.41
COMMD4-208ENST00000563220 SYNPOQ8N3V7 929 aa17.58■□□□□ 0.41
COMMD4-208ENST00000563220 POU5F2Q8N7G0 328 aa17.58■□□□□ 0.41
COMMD4-208ENST00000563220 CCDC138Q96M89 665 aa17.58■□□□□ 0.41
COMMD4-208ENST00000563220 NTMT1Q9BV86 223 aa17.58■□□□□ 0.41
COMMD4-208ENST00000563220 SLC22A14Q9Y267 594 aa17.58■□□□□ 0.41
COMMD4-208ENST00000563220 SLC17A4Q9Y2C5 497 aa17.58■□□□□ 0.41
COMMD4-208ENST00000563220 CA5BQ9Y2D0 317 aa17.58■□□□□ 0.41
COMMD4-208ENST00000563220 LRRC72A6NJI9 287 aa17.58■□□□□ 0.4
COMMD4-208ENST00000563220 GPR89AB7ZAQ6 455 aa17.58■□□□□ 0.4
COMMD4-208ENST00000563220 HNRNPCL1O60812 293 aaKnown RBP17.58■□□□□ 0.4
COMMD4-208ENST00000563220 WDR47O94967 919 aa17.58■□□□□ 0.4
COMMD4-208ENST00000563220 GPR89BP0CG08 455 aa17.58■□□□□ 0.4
COMMD4-208ENST00000563220 NQO1P15559 274 aaKnown RBP17.58■□□□□ 0.4
COMMD4-208ENST00000563220 MAPK9P45984 424 aa17.58■□□□□ 0.4
COMMD4-208ENST00000563220 HTR6P50406 440 aa17.58■□□□□ 0.4
COMMD4-208ENST00000563220 PFN3P60673 137 aa17.58■□□□□ 0.4
COMMD4-208ENST00000563220 ADHFE1Q8IWW8 467 aa17.58■□□□□ 0.4
COMMD4-208ENST00000563220 FBXO27Q8NI29 283 aa17.58■□□□□ 0.4
COMMD4-208ENST00000563220 SGK2Q9HBY8 427 aa17.58■□□□□ 0.4
COMMD4-208ENST00000563220 LTB4R2Q9NPC1 389 aa17.58■□□□□ 0.4
COMMD4-208ENST00000563220 TAS2R1Q9NYW7 299 aa17.58■□□□□ 0.4
COMMD4-208ENST00000563220 STOX2Q9P2F5 926 aaPredicted RBP17.58■□□□□ 0.4
COMMD4-208ENST00000563220 POLG2Q9UHN1 485 aa17.58■□□□□ 0.4
COMMD4-208ENST00000563220 RNF11Q9Y3C5 154 aa17.58■□□□□ 0.4
COMMD4-208ENST00000563220 LOC100653049A0A140TA62 436 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 C10orf142B7Z368 130 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 UBDO15205 165 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 KRT34O76011 436 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 CHEK2O96017 543 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 ITPKAP23677 461 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 PIK3R1P27986 724 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 CCR3P51677 355 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 ZP2Q05996 745 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 CDC16Q13042 620 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 RPA4Q13156 261 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 GRB7Q14451 532 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 UBXN2BQ14CS0 331 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 METRNLQ641Q3 311 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 ANO7Q6IWH7 933 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 CHST15Q7LFX5 561 aaPredicted RBP17.57■□□□□ 0.4
COMMD4-208ENST00000563220 EFL1Q7Z2Z2 1120 aaKnown RBP17.57■□□□□ 0.4
COMMD4-208ENST00000563220 FBXO15Q8NCQ5 510 aaPredicted RBP17.57■□□□□ 0.4
COMMD4-208ENST00000563220 MIPEPQ99797 713 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 FOXQ1Q9C009 403 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 EBF2Q9HAK2 575 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 MRPL40Q9NQ50 206 aaKnown RBP17.57■□□□□ 0.4
COMMD4-208ENST00000563220 INTS7Q9NVH2 962 aaKnown RBP17.57■□□□□ 0.4
COMMD4-208ENST00000563220 WNT16Q9UBV4 365 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 STK38LQ9Y2H1 464 aa17.57■□□□□ 0.4
COMMD4-208ENST00000563220 B2RBV5 119 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 H0Y8X5 98 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 SLC16A8O95907 504 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 EBLN1P0CF75 366 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 HGFP14210 728 aa17.56■□□□□ 0.4
COMMD4-208ENST00000563220 IMPA1P29218 277 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms