RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 LEPRP48357 1165 aaKnown RBP16.09■□□□□ 0.17
CDT1-202ENST00000562747 RAB15P59190 212 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 CBLBQ13191 982 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 WHAMMP3Q1A5X7 153 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 PLEKHS1Q5SXH7 462 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 IRGCQ6NXR0 463 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 ATG14Q6ZNE5 492 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 OTOAQ7RTW8 1153 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 KCNMB4Q86W47 210 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 DENND6AQ8IWF6 608 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 PHC3Q8NDX5 983 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 OR52E1Q8NGJ3 308 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 OR5K2Q8NHB8 316 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 LCN9Q8WX39 176 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 TAAR9Q96RI9 348 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 CD180Q99467 661 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 TRIT1Q9H3H1 467 aaKnown RBP16.09■□□□□ 0.17
CDT1-202ENST00000562747 ZNF768Q9H5H4 540 aaKnown RBP16.09■□□□□ 0.17
CDT1-202ENST00000562747 LATS2Q9NRM7 1088 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 HRASLS2Q9NWW9 162 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 SEMA5BQ9P283 1151 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 POLG2Q9UHN1 485 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 CRYL1Q9Y2S2 319 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 UTP11Q9Y3A2 253 aaKnown RBP16.09■□□□□ 0.17
CDT1-202ENST00000562747 PCDHGA3Q9Y5H0 932 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 TEX264Q9Y6I9 313 aa16.09■□□□□ 0.17
CDT1-202ENST00000562747 MATN2O00339 956 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 KDM1AO60341 852 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 RASSF9O75901 435 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 CD82P27701 267 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 ELK3P41970 407 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 SLC1A2P43004 574 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 CSE1LP55060 971 aaKnown RBP16.08■□□□□ 0.16
CDT1-202ENST00000562747 MRPS25P82663 173 aaKnown RBP16.08■□□□□ 0.16
CDT1-202ENST00000562747 SRSF1Q07955 248 aaKnown RBP eCLIP16.08■□□□□ 0.16
CDT1-202ENST00000562747 PRKAA1Q13131 559 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 CALCOCO2Q13137 446 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 CTBP1Q13363 440 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 HSP90AA5PQ58FG0 334 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 CACHD1Q5VU97 1274 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 DUPD1Q68J44 220 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 ARMC6Q6NXE6 501 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 FAM129CQ86XR2 697 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 VRK3Q8IV63 474 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 IGDCC3Q8IVU1 814 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 BMPERQ8N8U9 685 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 OR4E2Q8NGC2 313 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 OR5AR1Q8NGP9 310 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 GSDMBQ8TAX9 411 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 KLHL6Q8WZ60 621 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 UBXN4Q92575 508 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 PWWP2AQ96N64 755 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 HGH1Q9BTY7 390 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 DDA1Q9BW61 102 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 RAB17Q9H0T7 212 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 SRMSQ9H3Y6 488 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 OCIAD1Q9NX40 245 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 ZC3H7BQ9UGR2 993 aaKnown RBP16.08■□□□□ 0.16
CDT1-202ENST00000562747 FBXO5Q9UKT4 447 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 COMMD10Q9Y6G5 202 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 FLNCQ14315 2725 aa16.08■□□□□ 0.16
CDT1-202ENST00000562747 OR6C74A6NCV1 312 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 TLCD2A6NGC4 264 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.07■□□□□ 0.16
CDT1-202ENST00000562747 E7ESA3 106 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 NIPSNAP2O75323 286 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 RPN2P04844 631 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 CHRM3P20309 590 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 MC2RQ01718 297 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 PRKG2Q13237 762 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 TUBB2AQ13885 445 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 ZNF789Q5FWF6 425 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 DNTTIP2Q5QJE6 756 aaKnown RBP16.07■□□□□ 0.16
CDT1-202ENST00000562747 UNC5DQ6UXZ4 953 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 FAM92BQ6ZTR7 304 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 AMIGO1Q86WK6 493 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 CNTN4Q8IWV2 1026 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 CARFQ8N187 725 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 C2CD4AQ8NCU7 369 aaPredicted RBP16.07■□□□□ 0.16
CDT1-202ENST00000562747 ZNF592Q92610 1267 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 ART4Q93070 314 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 CERS2Q96G23 380 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 TUBB2BQ9BVA1 445 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 SLC12A9Q9BXP2 914 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 ASPSCR1Q9BZE9 553 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 CCDC68Q9H2F9 335 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 DPH5Q9H2P9 285 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 FBXO8Q9NRD0 319 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 FBXO6Q9NRD1 293 aaPredicted RBP16.07■□□□□ 0.16
CDT1-202ENST00000562747 IARS2Q9NSE4 1012 aaKnown RBP16.07■□□□□ 0.16
CDT1-202ENST00000562747 SLC39A1Q9NY26 324 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 CHMP2BQ9UQN3 213 aa16.07■□□□□ 0.16
CDT1-202ENST00000562747 E5RI56 91 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 KIF1CO43896 1103 aaKnown RBP16.06■□□□□ 0.16
CDT1-202ENST00000562747 ERVK-10P10266 1014 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 POLR2CP19387 275 aaPredicted RBP16.06■□□□□ 0.16
CDT1-202ENST00000562747 ATP5DP30049 168 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 SHMT2P34897 504 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 PPP1CAP62136 330 aa16.06■□□□□ 0.16
CDT1-202ENST00000562747 PDIA2Q13087 525 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms